RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	POLR2K	P53803	58 aa	Known RBP	10.21	□□□□□ -0.78
COPS7B-223	ENST00000611614	FOXI1	Q12951	378 aa		10.21	□□□□□ -0.78
COPS7B-223	ENST00000611614	SPINK13	Q1W4C9	94 aa		10.21	□□□□□ -0.78
COPS7B-223	ENST00000611614	WNK1	Q9H4A3	2382 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614	TRAV25	A0A0B4J276	109 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614	ADARB2-AS1	A8MUL3	147 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614	UBE2D3	P61077	147 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614	UBE2D2	P62837	147 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614		Q8N1Y9	231 aa		10.2	□□□□□ -0.78
COPS7B-223	ENST00000611614	VCY	O14598	125 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	TSPAN13	O95857	204 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	PMVK	Q15126	192 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	TIMM17A	Q99595	171 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	TRBV20-1	A0A075B6N2	111 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	CYSRT1	A8MQ03	144 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	KRTAP10-3	P60369	221 aa		10.19	□□□□□ -0.78
COPS7B-223	ENST00000611614	IGLV4-69	A0A075B6H9	119 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	CRYGD	P07320	174 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	PLEKHB2	Q96CS7	222 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	TRBV6-5	A0A0K0K1A5	114 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	IGIP	A6NJ69	53 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	C11orf86	A6NJI1	115 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614	ZFP2	Q6ZN57	461 aa		10.18	□□□□□ -0.78
COPS7B-223	ENST00000611614		A0A0J9YY99	117 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	KIR2DL4	Q99706	377 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	TP53TG1	Q9Y2A0	90 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	TRGV11	A0A075B6L2	103 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	SDHAF1	A6NFY7	115 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	PSMB2	P49721	201 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	SMCP	P49901	116 aa	Predicted RBP	10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	FAM74A4	Q5TZK3	123 aa		10.17	□□□□□ -0.78
COPS7B-223	ENST00000611614	LOC107984156	A0A0G2JMH3	177 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	DEFB131A	P59861	70 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	ARL17A	Q8IVW1	177 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	MTURN	Q8N3F0	131 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	PPDPFL	Q8WWR9	84 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	TRBV27	A0A0K0K1C4	114 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	TSHB	P01222	138 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	INSL3	P51460	131 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	ZNF56	Q15929	161 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	SBSPON	Q8IVN8	264 aa		10.16	□□□□□ -0.78
COPS7B-223	ENST00000611614	KNCN	A6PVL3	124 aa		10.15	□□□□□ -0.78
COPS7B-223	ENST00000611614	SLC25A29	Q8N8R3	303 aa		10.15	□□□□□ -0.78
COPS7B-223	ENST00000611614	NIPBL	Q6KC79	2804 aa	eCLIP	10.15	□□□□□ -0.78
COPS7B-223	ENST00000611614		M0QY20	66 aa		10.15	□□□□□ -0.78
COPS7B-223	ENST00000611614		A8MTW9	85 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	IGHV3-30	P01768	117 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	IGHV3-30-5	P0DP03	117 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	TEN1	Q86WV5	123 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	CKS1B	P61024	79 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	ZNF876P	Q49A33	203 aa		10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	TRPT1	Q86TN4	253 aa	Known RBP	10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.14	□□□□□ -0.79
COPS7B-223	ENST00000611614		M0QXV9	152 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	CMC4	P56277	68 aa	Predicted RBP	10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	C10orf126	Q8N4M7	172 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	CDIP1	Q9H305	208 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	MAP6D1	Q9H9H5	199 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	SORL1	Q92673	2214 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614		H3BMM0	161 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1A1	P0DJD3	496 aa	Known RBP	10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1C	P0DJD4	496 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	CRYBA4	P53673	196 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	RPL39	P62891	51 aa	Known RBP	10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1F	Q15415	496 aa	Known RBP	10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	RHOH	Q15669	191 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	NFE4	Q86UQ8	179 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	LINC00482	Q8N8I6	264 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614	DEFB104A	Q8WTQ1	72 aa		10.13	□□□□□ -0.79
COPS7B-223	ENST00000611614		A8MWV9	139 aa		10.12	□□□□□ -0.79
COPS7B-223	ENST00000611614	IGLV1-51	P01701	117 aa		10.12	□□□□□ -0.79
COPS7B-223	ENST00000611614	LGALS3	P17931	250 aa	Known RBP	10.12	□□□□□ -0.79
COPS7B-223	ENST00000611614	PRO1854	Q9UHT4	67 aa		10.12	□□□□□ -0.79
COPS7B-223	ENST00000611614	TNFRSF18	Q9Y5U5	241 aa		10.12	□□□□□ -0.79
COPS7B-223	ENST00000611614		J3QQQ9	107 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	CFC1B	P0CG36	223 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	CFC1	P0CG37	223 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	TMEM170B	Q5T4T1	132 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1B	A6NDE4	496 aa	Known RBP	10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1E	A6NEQ0	496 aa	Known RBP	10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	LEPROT	O15243	131 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	TCL1B	O95988	128 aa		10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	RBMY1D	P0C7P1	496 aa	Known RBP	10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	TEP1	Q99973	2627 aa	Known RBP	10.11	□□□□□ -0.79
COPS7B-223	ENST00000611614	AMELX	Q99217	191 aa		10.1	□□□□□ -0.79
COPS7B-223	ENST00000611614	TMEM262	E9PQX1	116 aa		10.1	□□□□□ -0.79
COPS7B-223	ENST00000611614	SPINK8	P0C7L1	97 aa		10.1	□□□□□ -0.79
COPS7B-223	ENST00000611614	TSPEAR-AS2	P59090	65 aa		10.1	□□□□□ -0.79
COPS7B-223	ENST00000611614	KRTAP24-1	Q3LI83	254 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	ZNRF2	Q8NHG8	242 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	CARD19	Q96LW7	228 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614		I3L3M4	83 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	HTN1	P15515	57 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	HERV-K104	P63124	156 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614		Q6ZUT4	128 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	STH	Q8IWL8	128 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614	EDA2R	Q9HAV5	297 aa		10.09	□□□□□ -0.79
COPS7B-223	ENST00000611614		A0A0B4J2C4	111 aa		10.08	□□□□□ -0.8
COPS7B-223	ENST00000611614	SCGB1C2	P0DMR2	95 aa		10.08	□□□□□ -0.8
COPS7B-223	ENST00000611614	EMP1	P54849	157 aa		10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms