RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 DPH3P1Q9H4G8 78 aa15.48■□□□□ 0.07
CDKN3-211ENST00000611205 NIT2Q9NQR4 276 aa15.48■□□□□ 0.07
CDKN3-211ENST00000611205 XKRY2A2RUG3 117 aa15.47■□□□□ 0.07
CDKN3-211ENST00000611205 RAB19A4D1S5 217 aa15.47■□□□□ 0.07
CDKN3-211ENST00000611205 AMTP48728 403 aa15.47■□□□□ 0.07
CDKN3-211ENST00000611205 LYZL1Q6UWQ5 148 aa15.47■□□□□ 0.07
CDKN3-211ENST00000611205 IGKV3OR2-268A0A0C4DH90 116 aa15.46■□□□□ 0.07
CDKN3-211ENST00000611205 F2Z2F3 143 aa15.46■□□□□ 0.07
CDKN3-211ENST00000611205 GNG4P50150 75 aa15.46■□□□□ 0.07
CDKN3-211ENST00000611205 COTL1Q14019 142 aa15.46■□□□□ 0.07
CDKN3-211ENST00000611205 TRAV1-1A0A0B4J248 108 aa15.45■□□□□ 0.06
CDKN3-211ENST00000611205 IFNA1P01562 189 aa15.45■□□□□ 0.06
CDKN3-211ENST00000611205 GAGE12HA6NDE8 117 aa15.44■□□□□ 0.06
CDKN3-211ENST00000611205 NTF3P20783 257 aa15.44■□□□□ 0.06
CDKN3-211ENST00000611205 C15orf56Q8N910 161 aa15.44■□□□□ 0.06
CDKN3-211ENST00000611205 PHOX2AO14813 284 aa15.43■□□□□ 0.06
CDKN3-211ENST00000611205 EIF5AL1Q6IS14 154 aaKnown RBP15.43■□□□□ 0.06
CDKN3-211ENST00000611205 SMIM12Q96EX1 92 aa15.43■□□□□ 0.06
CDKN3-211ENST00000611205 COX6A2Q02221 97 aa15.42■□□□□ 0.06
CDKN3-211ENST00000611205 HIGD2BQ4VC39 106 aa15.42■□□□□ 0.06
CDKN3-211ENST00000611205 CFAP161Q6P656 301 aa15.42■□□□□ 0.06
CDKN3-211ENST00000611205 C7orf33Q8WU49 177 aa15.42■□□□□ 0.06
CDKN3-211ENST00000611205 PLAC8Q9NZF1 115 aa15.42■□□□□ 0.06
CDKN3-211ENST00000611205 TEX46H3BTG2 121 aa15.4■□□□□ 0.06
CDKN3-211ENST00000611205 MED9Q9NWA0 146 aa15.4■□□□□ 0.06
CDKN3-211ENST00000611205 IGKV2-24A0A0C4DH68 120 aa15.39■□□□□ 0.05
CDKN3-211ENST00000611205 RPS10P46783 165 aaKnown RBP15.39■□□□□ 0.05
CDKN3-211ENST00000611205 MEF2BQ02080 365 aaPredicted RBP15.39■□□□□ 0.05
CDKN3-211ENST00000611205 TWIST1Q15672 202 aa15.39■□□□□ 0.05
CDKN3-211ENST00000611205 MAJINQ3KP22 176 aa15.39■□□□□ 0.05
CDKN3-211ENST00000611205 BIN3Q9NQY0 253 aa15.39■□□□□ 0.05
CDKN3-211ENST00000611205 TRBV20OR9-2A0A075B6H5 130 aa15.38■□□□□ 0.05
CDKN3-211ENST00000611205 TRAV26-2A0A0B4J265 109 aa15.38■□□□□ 0.05
CDKN3-211ENST00000611205 AMMECR1LQ6DCA0 310 aa15.38■□□□□ 0.05
CDKN3-211ENST00000611205 C9orf62Q8N4C0 152 aa15.38■□□□□ 0.05
CDKN3-211ENST00000611205 GTSF1Q8WW33 167 aa15.38■□□□□ 0.05
CDKN3-211ENST00000611205 PDE6DO43924 150 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 NDUFS6O75380 124 aaKnown RBP15.37■□□□□ 0.05
CDKN3-211ENST00000611205 CTRLP40313 264 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 GATD1Q8NB37 220 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 NUDT10Q8NFP7 164 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 PRSS3P2Q8NHM4 247 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 NUDT11Q96G61 164 aa15.37■□□□□ 0.05
CDKN3-211ENST00000611205 RNASEKQ6P5S7 137 aaKnown RBP15.36■□□□□ 0.05
CDKN3-211ENST00000611205 CHCHD10Q8WYQ3 142 aaPredicted RBP15.36■□□□□ 0.05
CDKN3-211ENST00000611205 Q6ZNX1 250 aa15.35■□□□□ 0.05
CDKN3-211ENST00000611205 TCTE3Q8IZS6 198 aa15.35■□□□□ 0.05
CDKN3-211ENST00000611205 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.34■□□□□ 0.05
CDKN3-211ENST00000611205 IGKV2-29A2NJV5 120 aaPredicted RBP15.34■□□□□ 0.05
CDKN3-211ENST00000611205 STPG4Q8N801 248 aa15.34■□□□□ 0.05
CDKN3-211ENST00000611205 LYPD6BQ8NI32 183 aa15.34■□□□□ 0.05
CDKN3-211ENST00000611205 RPL39LQ96EH5 51 aaKnown RBP15.34■□□□□ 0.05
CDKN3-211ENST00000611205 APCSP02743 223 aa15.32■□□□□ 0.04
CDKN3-211ENST00000611205 CNFNQ9BYD5 112 aa15.32■□□□□ 0.04
CDKN3-211ENST00000611205 RNASE7Q9H1E1 156 aaKnown RBP15.32■□□□□ 0.04
CDKN3-211ENST00000611205 RPP21Q9H633 154 aaKnown RBP15.32■□□□□ 0.04
CDKN3-211ENST00000611205 GVQW2A0A096LPI5 108 aaPredicted RBP15.31■□□□□ 0.04
CDKN3-211ENST00000611205 NCR2O95944 276 aa15.31■□□□□ 0.04
CDKN3-211ENST00000611205 BCL2P10415 239 aa15.31■□□□□ 0.04
CDKN3-211ENST00000611205 PRR3P79522 188 aaKnown RBP15.31■□□□□ 0.04
CDKN3-211ENST00000611205 SLC51BQ86UW2 128 aa15.31■□□□□ 0.04
CDKN3-211ENST00000611205 FGF6P10767 208 aa15.3■□□□□ 0.04
CDKN3-211ENST00000611205 A0A096LNI7 61 aa15.29■□□□□ 0.04
CDKN3-211ENST00000611205 H7C423 109 aa15.29■□□□□ 0.04
CDKN3-211ENST00000611205 SMIM15Q7Z3B0 74 aa15.29■□□□□ 0.04
CDKN3-211ENST00000611205 TAGLN2P37802 199 aaKnown RBP15.28■□□□□ 0.04
CDKN3-211ENST00000611205 FOXA3P55318 350 aaPredicted RBP15.28■□□□□ 0.04
CDKN3-211ENST00000611205 FOXI1Q12951 378 aa15.28■□□□□ 0.04
CDKN3-211ENST00000611205 LINC01600Q96MT4 127 aa15.28■□□□□ 0.04
CDKN3-211ENST00000611205 TNXBP22105 4242 aa15.27■□□□□ 0.04
CDKN3-211ENST00000611205 SDHAF1A6NFY7 115 aa15.27■□□□□ 0.04
CDKN3-211ENST00000611205 K7EN84 100 aa15.26■□□□□ 0.03
CDKN3-211ENST00000611205 XCL1P47992 114 aa15.26■□□□□ 0.03
CDKN3-211ENST00000611205 OR5A1Q8NGJ0 315 aa15.26■□□□□ 0.03
CDKN3-211ENST00000611205 OCC1Q8TAD7 63 aa15.26■□□□□ 0.03
CDKN3-211ENST00000611205 ODF1Q14990 250 aa15.25■□□□□ 0.03
CDKN3-211ENST00000611205 BTF3L4Q96K17 158 aa15.25■□□□□ 0.03
CDKN3-211ENST00000611205 ZNF25P17030 456 aaPredicted RBP15.24■□□□□ 0.03
CDKN3-211ENST00000611205 PMCHP20382 165 aa15.24■□□□□ 0.03
CDKN3-211ENST00000611205 TEX261Q6UWH6 196 aa15.24■□□□□ 0.03
CDKN3-211ENST00000611205 LINC00526Q96FQ7 95 aa15.24■□□□□ 0.03
CDKN3-211ENST00000611205 TMEM101Q96IK0 257 aa15.24■□□□□ 0.03
CDKN3-211ENST00000611205 CCL25O15444 150 aa15.23■□□□□ 0.03
CDKN3-211ENST00000611205 I3L3M4 83 aa15.22■□□□□ 0.03
CDKN3-211ENST00000611205 LINC00474Q9P2X8 69 aa15.22■□□□□ 0.03
CDKN3-211ENST00000611205 PKIGQ9Y2B9 76 aa15.22■□□□□ 0.03
CDKN3-211ENST00000611205 IGHV1-58A0A0C4DH39 117 aa15.21■□□□□ 0.03
CDKN3-211ENST00000611205 LINC00959A0A1B0GUT2 108 aa15.21■□□□□ 0.03
CDKN3-211ENST00000611205 FAM231BA6NCW3 169 aa15.21■□□□□ 0.03
CDKN3-211ENST00000611205 CARD19Q96LW7 228 aa15.21■□□□□ 0.03
CDKN3-211ENST00000611205 A0A0J9YXV3 536 aa15.2■□□□□ 0.02
CDKN3-211ENST00000611205 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
CDKN3-211ENST00000611205 GATCO43716 136 aaKnown RBP15.2■□□□□ 0.02
CDKN3-211ENST00000611205 SPINK6Q6UWN8 80 aa15.19■□□□□ 0.02
CDKN3-211ENST00000611205 REG3GQ6UW15 175 aa15.18■□□□□ 0.02
CDKN3-211ENST00000611205 TMEM242Q9NWH2 141 aa15.18■□□□□ 0.02
CDKN3-211ENST00000611205 LRP2P98164 4655 aa15.17■□□□□ 0.02
CDKN3-211ENST00000611205 TRBV6-5A0A0K0K1A5 114 aa15.17■□□□□ 0.02
CDKN3-211ENST00000611205 ZNF561-AS1K7EIQ3 104 aa15.17■□□□□ 0.02
CDKN3-211ENST00000611205 GAS8-AS1O95177 125 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 270.8 ms