RNA–Protein interactions for RNA: ENST00000608458.1

TAF4-206, Transcript of TATA-box binding protein associated factor 4, human

TSL 2

Gene TAF4, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF4-206	ENST00000608458	FHL3	Q13643	280 aa		12.83	□□□□□ -0.36
TAF4-206	ENST00000608458	TTC32	Q5I0X7	151 aa		12.83	□□□□□ -0.36
TAF4-206	ENST00000608458	OPRPN	Q99935	248 aa	Predicted RBP	12.83	□□□□□ -0.36
TAF4-206	ENST00000608458	ZNF462	Q96JM2	2506 aa		12.83	□□□□□ -0.36
TAF4-206	ENST00000608458		A0A0J9YY99	117 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	TSPEAR-AS2	P59090	65 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	LRRC75A-AS1	Q8N1F1	130 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	C4orf3	Q8WVX3	66 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	EDA2R	Q9HAV5	297 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	YAE1D1	Q9NRH1	226 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	DOPEY2	Q9Y3R5	2298 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458		A8MWV9	139 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	TMEM61	Q8N0U2	210 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	ZNF843	Q8N446	348 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	CENPE	Q02224	2701 aa		12.82	□□□□□ -0.36
TAF4-206	ENST00000608458	RBMY1B	A6NDE4	496 aa	Known RBP	12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	RBMY1E	A6NEQ0	496 aa	Known RBP	12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	SNCG	O76070	127 aa		12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	RBMY1D	P0C7P1	496 aa	Known RBP	12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	DUX3	Q96PT4	197 aa		12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	USP24	Q9UPU5	2620 aa		12.81	□□□□□ -0.36
TAF4-206	ENST00000608458	FAM208B	Q5VWN6	2430 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	UBE2D1	P51668	147 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	UBE2D3	P61077	147 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	UBE2D2	P62837	147 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458		Q96MF0	132 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	SPANXD	Q9BXN6	97 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	IGHV3-73	A0A0B4J1V6	119 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	KHDC1L	Q5JSQ8	128 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	CARD19	Q96LW7	228 aa		12.8	□□□□□ -0.36
TAF4-206	ENST00000608458	LRRK2	Q5S007	2527 aa		12.79	□□□□□ -0.36
TAF4-206	ENST00000608458		J3QQQ9	107 aa		12.79	□□□□□ -0.36
TAF4-206	ENST00000608458	PRRC2A	P48634	2157 aa	Known RBP	12.79	□□□□□ -0.36
TAF4-206	ENST00000608458	IGLV4-3	A0A075B6K6	122 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458		M0R2P5	195 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458	DYNLRB2	Q8TF09	96 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458	AMELX	Q99217	191 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458	MAP6D1	Q9H9H5	199 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458	ZFYVE26	Q68DK2	2539 aa		12.78	□□□□□ -0.36
TAF4-206	ENST00000608458	TMEM223	A0PJW6	202 aa		12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	PRM2	P04554	102 aa		12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	LGALS3	P17931	250 aa	Known RBP	12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	PROK1	P58294	105 aa		12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	ZNF415	Q09FC8	603 aa		12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	MRPL23	Q16540	153 aa	Known RBP	12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	SLC25A29	Q8N8R3	303 aa		12.77	□□□□□ -0.36
TAF4-206	ENST00000608458	PIK3CD-AS1	Q5SR53	167 aa		12.77	□□□□□ -0.37
TAF4-206	ENST00000608458	SPANXC	Q9NY87	97 aa		12.77	□□□□□ -0.37
TAF4-206	ENST00000608458	SORL1	Q92673	2214 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	LEPROT	O15243	131 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	IGHV3-30	P01768	117 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	SCGB1C2	P0DMR2	95 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	IGHV3-30-5	P0DP03	117 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	ZNF22	P17026	224 aa	Predicted RBP	12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	PYGO1	Q9Y3Y4	419 aa		12.76	□□□□□ -0.37
TAF4-206	ENST00000608458	PSMB2	P49721	201 aa		12.75	□□□□□ -0.37
TAF4-206	ENST00000608458	DEFB114	Q30KQ6	69 aa		12.75	□□□□□ -0.37
TAF4-206	ENST00000608458	TEX15	Q9BXT5	2789 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458		A0A0J9YXV3	536 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	PTH2	Q96A98	100 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	PTPN13	Q12923	2485 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	CD28	P10747	220 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	NDUFA11	Q86Y39	141 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	KRTAP1-3	Q8IUG1	177 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	LINC01600	Q96MT4	127 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	LINC01587	Q99440	93 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	NAV2	Q8IVL1	2488 aa		12.74	□□□□□ -0.37
TAF4-206	ENST00000608458	HIST2H2BD	Q6DRA6	164 aa		12.73	□□□□□ -0.37
TAF4-206	ENST00000608458	LINC00467	Q9BRT7	94 aa		12.73	□□□□□ -0.37
TAF4-206	ENST00000608458	CCDC179	H3BU77	68 aa		12.73	□□□□□ -0.37
TAF4-206	ENST00000608458		Q6ZSN1	163 aa		12.73	□□□□□ -0.37
TAF4-206	ENST00000608458	TMEM86B	Q8N661	226 aa		12.73	□□□□□ -0.37
TAF4-206	ENST00000608458	INS	P01308	110 aa		12.72	□□□□□ -0.37
TAF4-206	ENST00000608458	C5orf47	Q569G3	176 aa		12.72	□□□□□ -0.37
TAF4-206	ENST00000608458	C11orf72	Q8NBR9	251 aa		12.72	□□□□□ -0.37
TAF4-206	ENST00000608458	CREBBP	Q92793	2442 aa		12.72	□□□□□ -0.37
TAF4-206	ENST00000608458	IGHV3-64	A0A075B6Q5	118 aa		12.71	□□□□□ -0.37
TAF4-206	ENST00000608458	ABCA12	Q86UK0	2595 aa		12.71	□□□□□ -0.37
TAF4-206	ENST00000608458		Q6ZSV7	163 aa		12.71	□□□□□ -0.38
TAF4-206	ENST00000608458	FAM104A	Q969W3	186 aa		12.71	□□□□□ -0.38
TAF4-206	ENST00000608458		Q9UF83	564 aa		12.71	□□□□□ -0.38
TAF4-206	ENST00000608458	LOC107984156	A0A0G2JMH3	177 aa		12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	CFC1B	P0CG36	223 aa		12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	CFC1	P0CG37	223 aa		12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	ARL17A	Q8IVW1	177 aa		12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	CITED2	Q99967	270 aa	Predicted RBP	12.7	□□□□□ -0.38
TAF4-206	ENST00000608458	MRPS36	P82909	103 aa	Known RBP	12.69	□□□□□ -0.38
TAF4-206	ENST00000608458	SFTA2	Q6UW10	78 aa		12.69	□□□□□ -0.38
TAF4-206	ENST00000608458	ANKRD29	Q8N6D5	301 aa		12.69	□□□□□ -0.38
TAF4-206	ENST00000608458	BEAN1	Q3B7T3	259 aa		12.68	□□□□□ -0.38
TAF4-206	ENST00000608458	CHCHD7	Q9BUK0	85 aa		12.68	□□□□□ -0.38
TAF4-206	ENST00000608458	IGHV3-53	P01767	116 aa		12.68	□□□□□ -0.38
TAF4-206	ENST00000608458	MEIG1	Q5JSS6	88 aa		12.68	□□□□□ -0.38
TAF4-206	ENST00000608458	DNAJC9-AS1	A6NH13	148 aa		12.67	□□□□□ -0.38
TAF4-206	ENST00000608458	ODF3L2	Q3SX64	289 aa		12.67	□□□□□ -0.38
TAF4-206	ENST00000608458	C10orf126	Q8N4M7	172 aa		12.67	□□□□□ -0.38
TAF4-206	ENST00000608458	DNAJC30	Q96LL9	226 aa		12.67	□□□□□ -0.38
TAF4-206	ENST00000608458	TIMM21	Q9BVV7	248 aa		12.67	□□□□□ -0.38
TAF4-206	ENST00000608458	NACA	E9PAV3	2078 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms