RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 A0A0J9YXV3 536 aa11.5□□□□□ -0.57
CTSA-214ENST00000606788 UBE2V1Q13404 147 aa11.49□□□□□ -0.57
CTSA-214ENST00000606788 C20orf203Q8NBC4 194 aa11.49□□□□□ -0.57
CTSA-214ENST00000606788 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 GAGE7O76087 117 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 GAGE12FP0CL80 117 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 GAGE12GP0CL81 117 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 GAGE12IP0CL82 117 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 PCP4P48539 62 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 A8MWV9 139 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 TSPEAR-AS2P59090 65 aa11.48□□□□□ -0.57
CTSA-214ENST00000606788 A6NDN8 102 aa11.47□□□□□ -0.57
CTSA-214ENST00000606788 MAST4O15021 2626 aa11.47□□□□□ -0.57
CTSA-214ENST00000606788 TRAV2A0A0B4J234 112 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 GIG44P09565 113 aaPredicted RBP11.46□□□□□ -0.57
CTSA-214ENST00000606788 VCX2Q9H322 139 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 C16orf95Q9H693 158 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 A8MTW9 85 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 SEC11AP67812 179 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 LINC00482Q8N8I6 264 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 SPXQ9BT56 116 aa11.46□□□□□ -0.57
CTSA-214ENST00000606788 A8MZ25 164 aa11.46□□□□□ -0.58
CTSA-214ENST00000606788 GAGE1Q13065 139 aa11.46□□□□□ -0.58
CTSA-214ENST00000606788 GAGE12JA6NER3 117 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 IGLV1-51P01701 117 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 GAGE4Q13068 117 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 GAGE5Q13069 117 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 GAGE13Q4V321 117 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 LINC00467Q9BRT7 94 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 IGLV4-3A0A075B6K6 122 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 LOC100131303A0A0U1RQF7 123 aa11.45□□□□□ -0.58
CTSA-214ENST00000606788 TRGV2A0A075B6R0 118 aa11.44□□□□□ -0.58
CTSA-214ENST00000606788 TRAV25A0A0B4J276 109 aa11.44□□□□□ -0.58
CTSA-214ENST00000606788 NDUFA7O95182 113 aa11.44□□□□□ -0.58
CTSA-214ENST00000606788 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
CTSA-214ENST00000606788 UFSP1Q6NVU6 142 aa11.44□□□□□ -0.58
CTSA-214ENST00000606788 CEND1Q8N111 149 aa11.44□□□□□ -0.58
CTSA-214ENST00000606788 TRAV8-3A0A0A6YYJ7 113 aa11.43□□□□□ -0.58
CTSA-214ENST00000606788 DEFB4AO15263 64 aa11.43□□□□□ -0.58
CTSA-214ENST00000606788 SIVA1O15304 175 aa11.43□□□□□ -0.58
CTSA-214ENST00000606788 TIMM17AQ99595 171 aa11.43□□□□□ -0.58
CTSA-214ENST00000606788 E9PLD3 99 aa11.43□□□□□ -0.58
CTSA-214ENST00000606788 RNASE8Q8TDE3 154 aaKnown RBP11.43□□□□□ -0.58
CTSA-214ENST00000606788 DEFB130BP0DP73 79 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 DEFB130AP0DP74 79 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 MTURNQ8N3F0 131 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 TMEM141Q96I45 108 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 SMIM13P0DJ93 91 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 RPL32P62910 135 aaKnown RBP11.42□□□□□ -0.58
CTSA-214ENST00000606788 Q6ZUT4 128 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 C19orf73Q9NVV2 129 aa11.42□□□□□ -0.58
CTSA-214ENST00000606788 RHOHQ15669 191 aa11.41□□□□□ -0.58
CTSA-214ENST00000606788 COTL1Q14019 142 aa11.41□□□□□ -0.58
CTSA-214ENST00000606788 IGKV3OR2-268A0A0C4DH90 116 aa11.41□□□□□ -0.58
CTSA-214ENST00000606788 C9orf118A6NHY6 69 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 APOMO95445 188 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 SLC25A29Q8N8R3 303 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 LINC00694P0DN24 101 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 DGAT2L7PQ6IED9 249 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 CHCHD7Q9BUK0 85 aa11.4□□□□□ -0.58
CTSA-214ENST00000606788 NOTCH1P46531 2555 aa11.4□□□□□ -0.59
CTSA-214ENST00000606788 H3BRM9 83 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 HERVK_113P61574 105 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 FAM104AQ969W3 186 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 RS1O15537 224 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 RRN3P1Q2M238 152 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 NPC2P61916 151 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 HIGD1BQ9P298 99 aa11.39□□□□□ -0.59
CTSA-214ENST00000606788 ZNF22P17026 224 aaPredicted RBP11.38□□□□□ -0.59
CTSA-214ENST00000606788 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
CTSA-214ENST00000606788 TMEM263Q8WUH6 116 aaKnown RBP11.38□□□□□ -0.59
CTSA-214ENST00000606788 J3QQQ9 107 aa11.38□□□□□ -0.59
CTSA-214ENST00000606788 SPINK8P0C7L1 97 aa11.38□□□□□ -0.59
CTSA-214ENST00000606788 SAMD5Q5TGI4 173 aa11.38□□□□□ -0.59
CTSA-214ENST00000606788 PKD1L1Q8TDX9 2849 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 RHODO00212 210 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 CRLF1O75462 422 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 RNF151Q2KHN1 245 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 SPCS1Q9Y6A9 102 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.37□□□□□ -0.59
CTSA-214ENST00000606788 A0A096LPF7 62 aa11.37□□□□□ -0.59
CTSA-214ENST00000606788 TRAV13-1A0A0B4J241 112 aa11.36□□□□□ -0.59
CTSA-214ENST00000606788 C12orf74Q32Q52 190 aa11.36□□□□□ -0.59
CTSA-214ENST00000606788 TRBV7-3A0A075B6L6 115 aa11.36□□□□□ -0.59
CTSA-214ENST00000606788 A0A0U1RRA0 63 aa11.36□□□□□ -0.59
CTSA-214ENST00000606788 TRGV4A0A0C4DH28 118 aa11.35□□□□□ -0.59
CTSA-214ENST00000606788 UBE2D4Q9Y2X8 147 aa11.35□□□□□ -0.59
CTSA-214ENST00000606788 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
CTSA-214ENST00000606788 PLAC8L1A1L4L8 177 aa11.35□□□□□ -0.59
CTSA-214ENST00000606788 H7C2G1 150 aa11.34□□□□□ -0.59
CTSA-214ENST00000606788 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
CTSA-214ENST00000606788 K7EQD1 137 aa11.34□□□□□ -0.59
CTSA-214ENST00000606788 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
CTSA-214ENST00000606788 TM2D2Q9BX73 214 aa11.34□□□□□ -0.59
CTSA-214ENST00000606788 RPL36AP83881 106 aaKnown RBP11.34□□□□□ -0.59
CTSA-214ENST00000606788 NTM-AS1Q6ZSK4 140 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 892.9 ms