RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 INMT-MINDY4F8WBC2 141 aa9.35□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 ZNF561-AS1K7EIQ3 104 aa9.35□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 RASL11AQ6T310 242 aa9.35□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 TCEAL7Q9BRU2 100 aa9.35□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 ZNF726P1Q15940 193 aa9.34□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 CST9LP1Q5W188 147 aa9.34□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 RNASEKQ6P5S7 137 aaKnown RBP9.34□□□□□ -0.91
NEDD8-MDP1-204ENST00000605847 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 LOC107984640A0A0U1RRK4 108 aa9.33□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 FOXI1Q12951 378 aa9.33□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 TRAV1-1A0A0B4J248 108 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 A0A1W2PNN7 141 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 XCL1P47992 114 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 UBE2D1P51668 147 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 TPPP3Q9BW30 176 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 MED28Q9H204 178 aa9.32□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 S100A9P06702 114 aaKnown RBP9.31□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 ISOC2Q96AB3 205 aa9.31□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 H0Y9J4 135 aa9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 IGLV7-43P04211 117 aa9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 FGF6P10767 208 aa9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 FHITP49789 147 aa9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 EIF5AP63241 154 aaKnown RBP9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 BAGE2Q86Y30 109 aa9.3□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 AKR1C8PQ5T2L2 129 aa9.29□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 MAP1LC3B2A6NCE7 125 aa9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 CCL25O15444 150 aa9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 RPL13AP40429 203 aaKnown RBP9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 CAMPP49913 170 aa9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 OR5A1Q8NGJ0 315 aa9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 MAP1LC3BQ9GZQ8 125 aa9.28□□□□□ -0.92
NEDD8-MDP1-204ENST00000605847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 BORCS7-ASMTA0A0B4J1R7 106 aa9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 IGKV2-29A2NJV5 120 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 TRGC1P0CF51 173 aa9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 BCL2P10415 239 aa9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 RPL18AQ02543 176 aaKnown RBP9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 BTF3L4Q96K17 158 aa9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 MLST8Q9BVC4 326 aa9.27□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 A0A087WZ39 114 aa9.26□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 H7C423 109 aa9.26□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 RPL7L1Q6DKI1 246 aaKnown RBP9.26□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 TMEM101Q96IK0 257 aa9.26□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 MARVELD1Q9BSK0 173 aa9.26□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 IGLV4-69A0A075B6H9 119 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 LINC00959A0A1B0GUT2 108 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 APCSP02743 223 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 ZNF25P17030 456 aaPredicted RBP9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 NTF3P20783 257 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 SS18Q15532 418 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 TSKUQ8WUA8 353 aa9.25□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 PAGE4O60829 102 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 APOMO95445 188 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 MALP21145 153 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 Q6ZNX1 250 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 OR2D3Q8NGH3 330 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 CAMK2N2Q96S95 79 aa9.24□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 SCO2A0A1W2PP80 73 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 PFDN1O60925 122 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 NCR2O95944 276 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 IGLC6P0CF74 106 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 RPS20P60866 119 aaKnown RBP9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 EIF5AL1Q6IS14 154 aaKnown RBP9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 CD164L2Q6UWJ8 174 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 NUP35Q8NFH5 326 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 S100ZQ8WXG8 99 aa9.23□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 F2Z2F3 143 aa9.22□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 UPK1BO75841 260 aa9.22□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 TSPAN13O95857 204 aa9.22□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 KRTAP1-4P0C5Y4 121 aa9.22□□□□□ -0.93
NEDD8-MDP1-204ENST00000605847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 MEF2BQ02080 365 aaPredicted RBP9.21□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 TMUB2Q71RG4 321 aa9.2□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 DEFA1P59665 94 aa9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 LYZL1Q6UWQ5 148 aa9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 LINC00299Q6ZSB3 139 aa9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 GATD1Q8NB37 220 aa9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 OPRPNQ99935 248 aaPredicted RBP9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 CARHSP1Q9Y2V2 147 aaKnown RBP9.18□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 COX7A2LO14548 114 aa9.17□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 RPL35P42766 123 aaKnown RBP9.17□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 C2orf48Q96LS8 159 aa9.17□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 SDHAF1A6NFY7 115 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 BCL2L11O43521 198 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 IFNA1P01562 189 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 PMCHP20382 165 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 IFITM3Q01628 133 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 TWIST1Q15672 202 aa9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 RPL39LQ96EH5 51 aaKnown RBP9.16□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 A0A1B0GV50 99 aa9.15□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 UBE2BP63146 152 aa9.15□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
NEDD8-MDP1-204ENST00000605847 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms