RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 C2orf91Q6ZV80 131 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 PATE2Q6UY27 113 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 SOSTDC1Q6X4U4 206 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 K7EQD1 137 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 C11orf53Q8IXP5 236 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
CSMD1-216ENST00000602557 TIRAPP58753 221 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 H3BUA1 57 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 CTSZQ9UBR2 303 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 IGLV3-1P01715 115 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 SHISA2Q6UWI4 295 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 USP17L23D6RBM5 183 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 PMAIP1Q13794 54 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 TM2D2Q9BX73 214 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 DEFB112Q30KQ8 113 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 COX7CP15954 63 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 CAMK2N2Q96S95 79 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 ZMAT4Q9H898 229 aa6.69□□□□□ -1.34
CSMD1-216ENST00000602557 COX7A2LO14548 114 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV4-38-2P0DP08 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV3-30-3P0DP02 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV3-30P01768 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV3-33P01772 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV3-30-5P0DP03 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 PRAC2D3DTV9 90 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 K7EIM0 57 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 C16orf74Q96GX8 76 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 PPDPFQ9H3Y8 114 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGKV1-17P01599 117 aa6.68□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV7-81A0A0B4J1V7 117 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 A0A0J9YWU9 116 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 ATP5EP56381 51 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-216ENST00000602557 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 IGKV4-1P06312 121 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 LENEPQ9Y5L5 61 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 JMJD7-PLA2G4BH0Y9G9 81 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 DEFB1P60022 68 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 CFAP126Q5VTH2 177 aa6.67□□□□□ -1.34
CSMD1-216ENST00000602557 CEMP1Q6PRD7 247 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-216ENST00000602557 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 I3L2K1 104 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 ESM1Q9NQ30 184 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 BPY2O14599 106 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 MIR7-3HGQ8N6C7 128 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 NPBQ8NG41 125 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 IGHV4-30-2A0A087WSY4 118 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 IGLV2-8P01709 118 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 CTSGP08311 255 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 TMEM256-PLSCR3K7ERE1 68 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 FGF23Q9GZV9 251 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-216ENST00000602557 MRPL36Q9P0J6 103 aaKnown RBP6.66□□□□□ -1.34
CSMD1-216ENST00000602557 BLCAPP62952 87 aa6.66□□□□□ -1.34
CSMD1-216ENST00000602557 LINC00322Q6ZN03 302 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-216ENST00000602557 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
CSMD1-216ENST00000602557 SEC61GP60059 68 aa6.65□□□□□ -1.34
CSMD1-216ENST00000602557 TRBV7-3A0A075B6L6 115 aa6.65□□□□□ -1.34
CSMD1-216ENST00000602557 TRBV27A0A0K0K1C4 114 aa6.65□□□□□ -1.34
CSMD1-216ENST00000602557 TEX22C9J3V5 150 aa6.65□□□□□ -1.34
CSMD1-216ENST00000602557 DEFB4AO15263 64 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 H0Y9J4 135 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 C9orf47Q6ZRZ4 202 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 SERP1Q9Y6X1 66 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 SEM1Q6ZVN7 128 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 AJUBAQ96IF1 538 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 HIGD2BQ4VC39 106 aa6.65□□□□□ -1.35
CSMD1-216ENST00000602557 IGHV1-58A0A0C4DH39 117 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 IGLV11-55A0A075B6I3 123 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 C19orf71A6NCJ1 209 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 NANOS2P60321 138 aaKnown RBP6.64□□□□□ -1.35
CSMD1-216ENST00000602557 UBE2AP49459 152 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 PLA2G2CQ5R387 149 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 IGHV4-61A0A0C4DH41 118 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 P0DMU3 169 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 FAM231AP0DMU4 169 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 FAM231CP0DMU5 169 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
CSMD1-216ENST00000602557 COL5A1P20908 1838 aaPredicted RBP6.64□□□□□ -1.35
CSMD1-216ENST00000602557 COL4A4P53420 1690 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-216ENST00000602557 NDUFB1O75438 58 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 F8W735 103 aaPredicted RBP6.63□□□□□ -1.35
CSMD1-216ENST00000602557 J3QKU1 62 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 PSPHP1O15172 72 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 EPG5Q9HCE0 2579 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 UFSP1Q6NVU6 142 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 C5orf56Q8N8D9 126 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 DEFB135Q30KP9 77 aa6.63□□□□□ -1.35
CSMD1-216ENST00000602557 TMEM263Q8WUH6 116 aaKnown RBP6.62□□□□□ -1.35
CSMD1-216ENST00000602557 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 POM121L12Q8N7R1 296 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 Q6Q795 121 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 PIP4P1Q86T03 277 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 NRGNQ92686 78 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 NDUFA1O15239 70 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 PRR15LQ9BU68 103 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
CSMD1-216ENST00000602557 COX7BP24311 80 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 KRTAP27-1Q3LI81 207 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms