RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
LTBP4-225ENST00000599225 CLPSL2Q6UWE3 100 aa10.44□□□□□ -0.74
LTBP4-225ENST00000599225 CLRN3Q8NCR9 226 aa10.44□□□□□ -0.74
LTBP4-225ENST00000599225 IGLV4-60A0A075B6I1 120 aa10.43□□□□□ -0.74
LTBP4-225ENST00000599225 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
LTBP4-225ENST00000599225 TWIST1Q15672 202 aa10.43□□□□□ -0.74
LTBP4-225ENST00000599225 GATD1Q8NB37 220 aa10.43□□□□□ -0.74
LTBP4-225ENST00000599225 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
LTBP4-225ENST00000599225 COTL1Q14019 142 aa10.42□□□□□ -0.74
LTBP4-225ENST00000599225 FAM231DQ6ZW35 169 aa10.42□□□□□ -0.74
LTBP4-225ENST00000599225 AKAP14Q86UN6 197 aa10.42□□□□□ -0.74
LTBP4-225ENST00000599225 GFRA4Q9GZZ7 299 aa10.42□□□□□ -0.74
LTBP4-225ENST00000599225 LRP1Q07954 4544 aaKnown RBP10.41□□□□□ -0.74
LTBP4-225ENST00000599225 NDUFS6O75380 124 aaKnown RBP10.41□□□□□ -0.74
LTBP4-225ENST00000599225 FOXA3P55318 350 aaPredicted RBP10.41□□□□□ -0.74
LTBP4-225ENST00000599225 CNBPP62633 177 aaKnown RBP10.41□□□□□ -0.74
LTBP4-225ENST00000599225 SDIM1Q6ZPB5 146 aa10.41□□□□□ -0.74
LTBP4-225ENST00000599225 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
LTBP4-225ENST00000599225 ALKAL2Q6UX46 152 aa10.4□□□□□ -0.74
LTBP4-225ENST00000599225 TRAV26-2A0A0B4J265 109 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 A8MWL6 223 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 J3QL48 77 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 AMTP48728 403 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 CT83Q5H943 113 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 TEX261Q6UWH6 196 aa10.39□□□□□ -0.75
LTBP4-225ENST00000599225 UBE2L6O14933 153 aa10.38□□□□□ -0.75
LTBP4-225ENST00000599225 NCR2O95944 276 aa10.38□□□□□ -0.75
LTBP4-225ENST00000599225 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
LTBP4-225ENST00000599225 SMIM15Q7Z3B0 74 aa10.38□□□□□ -0.75
LTBP4-225ENST00000599225 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
LTBP4-225ENST00000599225 H7C423 109 aa10.37□□□□□ -0.75
LTBP4-225ENST00000599225 GATCO43716 136 aaKnown RBP10.37□□□□□ -0.75
LTBP4-225ENST00000599225 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.37□□□□□ -0.75
LTBP4-225ENST00000599225 RPL39LQ96EH5 51 aaKnown RBP10.36□□□□□ -0.75
LTBP4-225ENST00000599225 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 hDV102S1A0JD36 115 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 PANO1I0J062 215 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 SLPIP03973 132 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 FAM210AQ96ND0 272 aa10.35□□□□□ -0.75
LTBP4-225ENST00000599225 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
LTBP4-225ENST00000599225 SDHAF1A6NFY7 115 aa10.34□□□□□ -0.75
LTBP4-225ENST00000599225 OXTP01178 125 aa10.34□□□□□ -0.75
LTBP4-225ENST00000599225 LINC01551Q86U37 167 aa10.34□□□□□ -0.75
LTBP4-225ENST00000599225 hCG_2014768A0A024R1R8 64 aa10.33□□□□□ -0.76
LTBP4-225ENST00000599225 TSKUQ8WUA8 353 aa10.33□□□□□ -0.76
LTBP4-225ENST00000599225 SMIM7Q9BQ49 75 aa10.33□□□□□ -0.76
LTBP4-225ENST00000599225 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
LTBP4-225ENST00000599225 IGHV3-64A0A075B6Q5 118 aa10.32□□□□□ -0.76
LTBP4-225ENST00000599225 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.32□□□□□ -0.76
LTBP4-225ENST00000599225 APCSP02743 223 aa10.32□□□□□ -0.76
LTBP4-225ENST00000599225 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
LTBP4-225ENST00000599225 CFAP161Q6P656 301 aa10.32□□□□□ -0.76
LTBP4-225ENST00000599225 C15orf56Q8N910 161 aa10.32□□□□□ -0.76
LTBP4-225ENST00000599225 EIF5A2Q9GZV4 153 aaKnown RBP10.32□□□□□ -0.76
LTBP4-225ENST00000599225 A0A1B0GUT8 65 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 HIGD1CA8MV81 97 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 I3L3M4 83 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 FGF6P10767 208 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 ZNF25P17030 456 aaPredicted RBP10.31□□□□□ -0.76
LTBP4-225ENST00000599225 AMMECR1LQ6DCA0 310 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 RNF185Q96GF1 192 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 TMEM191AQ9H0A3 160 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 OSTCQ9NRP0 149 aa10.31□□□□□ -0.76
LTBP4-225ENST00000599225 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.3□□□□□ -0.76
LTBP4-225ENST00000599225 IGKV2-29A2NJV5 120 aaPredicted RBP10.3□□□□□ -0.76
LTBP4-225ENST00000599225 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
LTBP4-225ENST00000599225 ESDP10768 282 aa10.3□□□□□ -0.76
LTBP4-225ENST00000599225 CEBPGP53567 150 aa10.3□□□□□ -0.76
LTBP4-225ENST00000599225 CHCHD10Q8WYQ3 142 aaPredicted RBP10.3□□□□□ -0.76
LTBP4-225ENST00000599225 TRBV27A0A0K0K1C4 114 aa10.29□□□□□ -0.76
LTBP4-225ENST00000599225 GAS8-AS1O95177 125 aa10.29□□□□□ -0.76
LTBP4-225ENST00000599225 SRP19P09132 144 aaKnown RBP10.29□□□□□ -0.76
LTBP4-225ENST00000599225 PMCHP20382 165 aa10.29□□□□□ -0.76
LTBP4-225ENST00000599225 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
LTBP4-225ENST00000599225 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
LTBP4-225ENST00000599225 ZNF727A8MUV8 499 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 TSHBP01222 138 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 RAB4AP20338 218 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 RNASEKQ6P5S7 137 aaKnown RBP10.28□□□□□ -0.76
LTBP4-225ENST00000599225 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 MRAP2Q96G30 205 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 ST20Q9HBF5 79 aa10.28□□□□□ -0.76
LTBP4-225ENST00000599225 GVQW2A0A096LPI5 108 aaPredicted RBP10.27□□□□□ -0.77
LTBP4-225ENST00000599225 IGKV3OR2-268A0A0C4DH90 116 aa10.27□□□□□ -0.77
LTBP4-225ENST00000599225 HNRNPA3P51991 378 aaKnown RBP10.27□□□□□ -0.77
LTBP4-225ENST00000599225 FOXI1Q12951 378 aa10.27□□□□□ -0.77
LTBP4-225ENST00000599225 MRPL52Q86TS9 123 aaKnown RBP10.27□□□□□ -0.77
LTBP4-225ENST00000599225 V9GYV3 84 aa10.27□□□□□ -0.77
LTBP4-225ENST00000599225 A0A087WYN8 130 aa10.26□□□□□ -0.77
LTBP4-225ENST00000599225 RPS10P46783 165 aaKnown RBP10.26□□□□□ -0.77
LTBP4-225ENST00000599225 FAM74A3Q4VXF1 159 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 TMEM101Q96IK0 257 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 BTF3L4Q96K17 158 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 PLAC8Q9NZF1 115 aa10.25□□□□□ -0.77
LTBP4-225ENST00000599225 LINC00959A0A1B0GUT2 108 aa10.24□□□□□ -0.77
LTBP4-225ENST00000599225 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms