RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 RNASE13Q5GAN3 156 aaKnown RBP16.44■□□□□ 0.22
SRRM1-222ENST00000596378 C1orf158Q8N1D5 194 aa16.44■□□□□ 0.22
SRRM1-222ENST00000596378 IGHV3-38A0A0C4DH36 116 aa16.44■□□□□ 0.22
SRRM1-222ENST00000596378 SRSF9Q13242 221 aaKnown RBP eCLIP16.44■□□□□ 0.22
SRRM1-222ENST00000596378 VCX2Q9H322 139 aa16.44■□□□□ 0.22
SRRM1-222ENST00000596378 TRAV25A0A0B4J276 109 aa16.43■□□□□ 0.22
SRRM1-222ENST00000596378 LINC00467Q9BRT7 94 aa16.43■□□□□ 0.22
SRRM1-222ENST00000596378 A0A0J9YY99 117 aa16.42■□□□□ 0.22
SRRM1-222ENST00000596378 ZNF479Q96JC4 524 aa16.42■□□□□ 0.22
SRRM1-222ENST00000596378 TSSC4Q9Y5U2 329 aaPredicted RBP16.42■□□□□ 0.22
SRRM1-222ENST00000596378 NOTCH3Q9UM47 2321 aa16.42■□□□□ 0.22
SRRM1-222ENST00000596378 KMT2BQ9UMN6 2715 aaPredicted RBP16.42■□□□□ 0.22
SRRM1-222ENST00000596378 PIK3CD-AS1Q5SR53 167 aa16.42■□□□□ 0.22
SRRM1-222ENST00000596378 OR5A1Q8NGJ0 315 aa16.42■□□□□ 0.22
SRRM1-222ENST00000596378 J3QQQ9 107 aa16.41■□□□□ 0.22
SRRM1-222ENST00000596378 ZNF22P17026 224 aaPredicted RBP16.41■□□□□ 0.22
SRRM1-222ENST00000596378 AMELXQ99217 191 aa16.41■□□□□ 0.22
SRRM1-222ENST00000596378 J3QKU1 62 aa16.41■□□□□ 0.22
SRRM1-222ENST00000596378 SAP30O75446 220 aa16.41■□□□□ 0.22
SRRM1-222ENST00000596378 RNASE1P07998 156 aaKnown RBP16.41■□□□□ 0.22
SRRM1-222ENST00000596378 SPXQ9BT56 116 aa16.41■□□□□ 0.22
SRRM1-222ENST00000596378 A0A1B0GWB2 263 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 TMEM223A0PJW6 202 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 BEAN1Q3B7T3 259 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 PTH2Q96A98 100 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 WFDC10AQ9H1F0 79 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 CHCHD7Q9BUK0 85 aa16.4■□□□□ 0.22
SRRM1-222ENST00000596378 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.39■□□□□ 0.21
SRRM1-222ENST00000596378 IGKV2-29A2NJV5 120 aaPredicted RBP16.39■□□□□ 0.21
SRRM1-222ENST00000596378 RHODO00212 210 aa16.39■□□□□ 0.21
SRRM1-222ENST00000596378 IGHV3-53P01767 116 aa16.39■□□□□ 0.21
SRRM1-222ENST00000596378 CBY1Q9Y3M2 126 aa16.39■□□□□ 0.21
SRRM1-222ENST00000596378 RS1O15537 224 aa16.39■□□□□ 0.21
SRRM1-222ENST00000596378 LGALS3P17931 250 aaKnown RBP16.39■□□□□ 0.21
SRRM1-222ENST00000596378 CLUHP3Q96NS8 147 aa16.39■□□□□ 0.21
SRRM1-222ENST00000596378 FASNP49327 2511 aaKnown RBP16.38■□□□□ 0.21
SRRM1-222ENST00000596378 RRN3P1Q2M238 152 aa16.37■□□□□ 0.21
SRRM1-222ENST00000596378 PYGO1Q9Y3Y4 419 aa16.37■□□□□ 0.21
SRRM1-222ENST00000596378 TRGV1A0A0A0MS02 117 aa16.37■□□□□ 0.21
SRRM1-222ENST00000596378 SMR3AQ99954 134 aa16.37■□□□□ 0.21
SRRM1-222ENST00000596378 C16orf95Q9H693 158 aa16.36■□□□□ 0.21
SRRM1-222ENST00000596378 LEPROTO15243 131 aa16.35■□□□□ 0.21
SRRM1-222ENST00000596378 PGPEP1Q9NXJ5 209 aa16.35■□□□□ 0.21
SRRM1-222ENST00000596378 UBE2D4Q9Y2X8 147 aa16.35■□□□□ 0.21
SRRM1-222ENST00000596378 IL17DQ8TAD2 202 aa16.34■□□□□ 0.21
SRRM1-222ENST00000596378 SLC25A29Q8N8R3 303 aa16.34■□□□□ 0.21
SRRM1-222ENST00000596378 APOMO95445 188 aa16.33■□□□□ 0.2
SRRM1-222ENST00000596378 UBE2D1P51668 147 aa16.33■□□□□ 0.2
SRRM1-222ENST00000596378 Q6ZTI0 123 aa16.33■□□□□ 0.2
SRRM1-222ENST00000596378 IGHV3-30P01768 117 aa16.33■□□□□ 0.2
SRRM1-222ENST00000596378 IGHV3-30-5P0DP03 117 aa16.33■□□□□ 0.2
SRRM1-222ENST00000596378 TMEM238LA0A1B0GVL6 79 aa16.32■□□□□ 0.2
SRRM1-222ENST00000596378 A6NJY4 79 aa16.32■□□□□ 0.2
SRRM1-222ENST00000596378 H3BMG7 143 aa16.32■□□□□ 0.2
SRRM1-222ENST00000596378 Q6ZUT4 128 aa16.32■□□□□ 0.2
SRRM1-222ENST00000596378 ADARB2-AS1A8MUL3 147 aa16.31■□□□□ 0.2
SRRM1-222ENST00000596378 GIG44P09565 113 aaPredicted RBP16.31■□□□□ 0.2
SRRM1-222ENST00000596378 COTL1Q14019 142 aa16.31■□□□□ 0.2
SRRM1-222ENST00000596378 SFTA2Q6UW10 78 aa16.31■□□□□ 0.2
SRRM1-222ENST00000596378 K7ERU9 68 aa16.31■□□□□ 0.2
SRRM1-222ENST00000596378 RPL35AP18077 110 aaKnown RBP16.31■□□□□ 0.2
SRRM1-222ENST00000596378 MRPS36P82909 103 aaKnown RBP16.31■□□□□ 0.2
SRRM1-222ENST00000596378 DNAJC30Q96LL9 226 aa16.31■□□□□ 0.2
SRRM1-222ENST00000596378 SPANXB1Q9NS25 103 aaPredicted RBP16.31■□□□□ 0.2
SRRM1-222ENST00000596378 TRAV8-3A0A0A6YYJ7 113 aa16.3■□□□□ 0.2
SRRM1-222ENST00000596378 GCN1Q92616 2671 aaKnown RBP16.3■□□□□ 0.2
SRRM1-222ENST00000596378 MTURNQ8N3F0 131 aa16.3■□□□□ 0.2
SRRM1-222ENST00000596378 VPS25Q9BRG1 176 aa16.3■□□□□ 0.2
SRRM1-222ENST00000596378 HILS1P60008 231 aa16.29■□□□□ 0.2
SRRM1-222ENST00000596378 ZNF418Q8TF45 676 aaPredicted RBP16.29■□□□□ 0.2
SRRM1-222ENST00000596378 SPANXA1Q9NS26 97 aa16.29■□□□□ 0.2
SRRM1-222ENST00000596378 IGLV1-51P01701 117 aa16.28■□□□□ 0.2
SRRM1-222ENST00000596378 IGHV3-30-3P0DP02 117 aa16.28■□□□□ 0.2
SRRM1-222ENST00000596378 C10orf126Q8N4M7 172 aa16.28■□□□□ 0.2
SRRM1-222ENST00000596378 TMEM263Q8WUH6 116 aaKnown RBP16.28■□□□□ 0.2
SRRM1-222ENST00000596378 TSPAN13O95857 204 aa16.28■□□□□ 0.2
SRRM1-222ENST00000596378 NOP10Q9NPE3 64 aaKnown RBP16.28■□□□□ 0.2
SRRM1-222ENST00000596378 TIMM21Q9BVV7 248 aa16.27■□□□□ 0.2
SRRM1-222ENST00000596378 HECTD1Q9ULT8 2610 aa16.27■□□□□ 0.19
SRRM1-222ENST00000596378 NDUFA11Q86Y39 141 aa16.27■□□□□ 0.19
SRRM1-222ENST00000596378 C19orf73Q9NVV2 129 aa16.27■□□□□ 0.19
SRRM1-222ENST00000596378 HIVEP2P31629 2446 aa16.26■□□□□ 0.19
SRRM1-222ENST00000596378 A8MZ25 164 aa16.26■□□□□ 0.19
SRRM1-222ENST00000596378 CRYBA4P53673 196 aa16.26■□□□□ 0.19
SRRM1-222ENST00000596378 CFC1BP0CG36 223 aa16.25■□□□□ 0.19
SRRM1-222ENST00000596378 CFC1P0CG37 223 aa16.25■□□□□ 0.19
SRRM1-222ENST00000596378 WFDC2Q14508 124 aa16.25■□□□□ 0.19
SRRM1-222ENST00000596378 RPL24P83731 157 aaKnown RBP16.24■□□□□ 0.19
SRRM1-222ENST00000596378 SPINK8P0C7L1 97 aa16.24■□□□□ 0.19
SRRM1-222ENST00000596378 C2CD3Q4AC94 2353 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 K7EQD1 137 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 A0A0J9YXY3 114 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 TINCRA0A1B0GVN0 87 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 LINC00694P0DN24 101 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 KRTAP10-3P60369 221 aa16.23■□□□□ 0.19
SRRM1-222ENST00000596378 LOC107984156A0A0G2JMH3 177 aa16.22■□□□□ 0.19
SRRM1-222ENST00000596378 PLAC8L1A1L4L8 177 aa16.22■□□□□ 0.19
SRRM1-222ENST00000596378 C21orf62-AS1Q17RA5 79 aa16.22■□□□□ 0.19
SRRM1-222ENST00000596378 ARL17AQ8IVW1 177 aa16.22■□□□□ 0.19
SRRM1-222ENST00000596378 TEX48A0A1B0GUV7 120 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms