RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 C22orf34Q6ZV56 151 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 TRAV13-2A0A0B4J235 113 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 COX6B1P14854 86 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 LINC00574Q9H8X3 128 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 C14orf132Q9NPU4 83 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 JMJD1CQ15652 2540 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 ABCA12Q86UK0 2595 aa9.33□□□□□ -0.92
LIG1-207ENST00000594759 TSPEAR-AS2P59090 65 aa9.32□□□□□ -0.92
LIG1-207ENST00000594759 IGLV11-55A0A075B6I3 123 aa9.32□□□□□ -0.92
LIG1-207ENST00000594759 MRPL53Q96EL3 112 aaKnown RBP9.32□□□□□ -0.92
LIG1-207ENST00000594759 IGHV1-58A0A0C4DH39 117 aa9.32□□□□□ -0.92
LIG1-207ENST00000594759 C11orf21Q9P2W6 132 aa9.32□□□□□ -0.92
LIG1-207ENST00000594759 MALP21145 153 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 ZNRF2Q8NHG8 242 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 F6UB75 175 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 NXPH4O95158 308 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 TIRAPP58753 221 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 C9orf47Q6ZRZ4 202 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 CENPEQ02224 2701 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 IGHV1-69P01742 117 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 PSMB8P28062 276 aa9.31□□□□□ -0.92
LIG1-207ENST00000594759 REV3LO60673 3130 aa9.3□□□□□ -0.92
LIG1-207ENST00000594759 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
LIG1-207ENST00000594759 LAMTOR3Q9UHA4 124 aa9.3□□□□□ -0.92
LIG1-207ENST00000594759 HIVEP2P31629 2446 aa9.3□□□□□ -0.92
LIG1-207ENST00000594759 TMEM61Q8N0U2 210 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 DPH3Q96FX2 82 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 IGHV7-4-1A0A0J9YVY3 117 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 CRYGAP11844 174 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 C20orf203Q8NBC4 194 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 BRD3OSQ6XYD6 125 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 KIR2DL5BQ8NHK3 375 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
LIG1-207ENST00000594759 RPL35AP18077 110 aaKnown RBP9.28□□□□□ -0.92
LIG1-207ENST00000594759 Q8NA96 180 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 PKD1L2Q7Z442 2459 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 LINC01546A6NGU7 62 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 RPL36AP83881 106 aaKnown RBP9.28□□□□□ -0.92
LIG1-207ENST00000594759 VMO1Q7Z5L0 202 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 RPL36ALQ969Q0 106 aaKnown RBP9.28□□□□□ -0.92
LIG1-207ENST00000594759 PRO0628Q9UI54 55 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 MTORP42345 2549 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 G3V318 75 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 ELANEP08246 267 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 DEFB1P60022 68 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 Q6ZSV7 163 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 TMEM86BQ8N661 226 aa9.28□□□□□ -0.92
LIG1-207ENST00000594759 IGHV3OR16-12A0A075B7B8 117 aa9.27□□□□□ -0.93
LIG1-207ENST00000594759 ZNF462Q96JM2 2506 aa9.27□□□□□ -0.93
LIG1-207ENST00000594759 FAM110DQ8TAY7 271 aaPredicted RBP9.27□□□□□ -0.93
LIG1-207ENST00000594759 SMAD5-AS1Q9Y6J3 95 aa9.27□□□□□ -0.93
LIG1-207ENST00000594759 IGIPA6NJ69 53 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 TNFRSF13BO14836 293 aaPredicted RBP9.26□□□□□ -0.93
LIG1-207ENST00000594759 IGF2-ASQ6U949 168 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 COL4A2P08572 1712 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 A0A087WVE0 104 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 KLK9Q9UKQ9 250 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 ATP6V0E1O15342 81 aa9.26□□□□□ -0.93
LIG1-207ENST00000594759 IGHV3-38A0A0C4DH36 116 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 H0YGX0 51 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 MAPK1IP1LQ8NDC0 245 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 ORMDL1Q9P0S3 153 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 IGHV4-4A0A075B6R2 117 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 TRAV12-2A0A075B6T6 113 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.25□□□□□ -0.93
LIG1-207ENST00000594759 IGKV2-29A2NJV5 120 aaPredicted RBP9.25□□□□□ -0.93
LIG1-207ENST00000594759 J3QLI3 93 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 LECT2O14960 151 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 IGF1P05019 195 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 MED14OSP0DP75 135 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 COX8CQ7Z4L0 72 aa9.25□□□□□ -0.93
LIG1-207ENST00000594759 KAAG1Q9UBP8 84 aa9.24□□□□□ -0.93
LIG1-207ENST00000594759 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
LIG1-207ENST00000594759 MAP1AP78559 2803 aaPredicted RBP9.24□□□□□ -0.93
LIG1-207ENST00000594759 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
LIG1-207ENST00000594759 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
LIG1-207ENST00000594759 A8MZ25 164 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 SEC61GP60059 68 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 IGHV1OR15-1A0A075B7D0 117 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 CRYGDP07320 174 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 HIST2H2BCQ6DN03 193 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 HIST2H2BDQ6DRA6 164 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 IGLV4-3A0A075B6K6 122 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 EBI3Q14213 229 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 SPINK13Q1W4C9 94 aa9.23□□□□□ -0.93
LIG1-207ENST00000594759 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
LIG1-207ENST00000594759 POLR2KP53803 58 aaKnown RBP9.22□□□□□ -0.93
LIG1-207ENST00000594759 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
LIG1-207ENST00000594759 SND1-IT1Q9HBX3 110 aa9.22□□□□□ -0.93
LIG1-207ENST00000594759 FREM2Q5SZK8 3169 aa9.22□□□□□ -0.93
LIG1-207ENST00000594759 PRRC2AP48634 2157 aaKnown RBP9.22□□□□□ -0.93
LIG1-207ENST00000594759 A0A0J9YX75 114 aa9.22□□□□□ -0.93
LIG1-207ENST00000594759 ZNF292O60281 2723 aa9.21□□□□□ -0.93
LIG1-207ENST00000594759 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms