RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.31
VPS4B-207ENST00000591519 NAT8Q9UHE5 227 aa6.84□□□□□ -1.31
VPS4B-207ENST00000591519 KIF25-AS1Q9Y6Z4 181 aa6.84□□□□□ -1.31
VPS4B-207ENST00000591519 DNAH8Q96JB1 4490 aa6.84□□□□□ -1.32
VPS4B-207ENST00000591519 TRBV10-1A0A0K0K1A3 114 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 TRGC1P0CF51 173 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
VPS4B-207ENST00000591519 FAM74A3Q4VXF1 159 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 SUMO4Q6EEV6 95 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 ATRAIDQ6UW56 229 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 BAALCQ8WXS3 180 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 ISOC2Q96AB3 205 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 RMI2Q96E14 147 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
VPS4B-207ENST00000591519 KRTAP29-1A8MX34 341 aaPredicted RBP6.82□□□□□ -1.32
VPS4B-207ENST00000591519 LECT2O14960 151 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 UBE2D3P61077 147 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 UBE2D2P62837 147 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 OR10G8Q8NGN5 311 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 DEFB104AQ8WTQ1 72 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 BORCS7Q96B45 105 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 URGCP-MRPS24S4R325 110 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 V9GYV3 84 aa6.82□□□□□ -1.32
VPS4B-207ENST00000591519 TRBV7-3A0A075B6L6 115 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 TRAV26-2A0A0B4J265 109 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 HIGD1CA8MV81 97 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 ELOBQ15370 118 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 CT83Q5H943 113 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 CLLU1Q5K131 121 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 WDR73Q6P4I2 378 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 SMIM15Q7Z3B0 74 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 TSKUQ8WUA8 353 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 SMDT1Q9H4I9 107 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 KLK12Q9UKR0 248 aa6.81□□□□□ -1.32
VPS4B-207ENST00000591519 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.8□□□□□ -1.32
VPS4B-207ENST00000591519 M0QY20 66 aa6.8□□□□□ -1.32
VPS4B-207ENST00000591519 Q0VG73 95 aa6.8□□□□□ -1.32
VPS4B-207ENST00000591519 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
VPS4B-207ENST00000591519 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
VPS4B-207ENST00000591519 IGKV2D-24A0A075B6R9 120 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 A0A087WX48 190 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 H7C1H1 209 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 RASL11AQ6T310 242 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 SCXQ7RTU7 201 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 NUP35Q8NFH5 326 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
VPS4B-207ENST00000591519 TRBV6-8A0A0A6YYG3 113 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 TMEM262E9PQX1 116 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 KRTAP10-4P60372 401 aaPredicted RBP6.78□□□□□ -1.32
VPS4B-207ENST00000591519 LINC01620Q4KN68 170 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.78□□□□□ -1.32
VPS4B-207ENST00000591519 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 RPL39LQ96EH5 51 aaKnown RBP6.78□□□□□ -1.32
VPS4B-207ENST00000591519 GFRA4Q9GZZ7 299 aa6.78□□□□□ -1.32
VPS4B-207ENST00000591519 RIGQ13278 110 aa6.77□□□□□ -1.33
VPS4B-207ENST00000591519 KCNIP4Q6PIL6 250 aa6.77□□□□□ -1.33
VPS4B-207ENST00000591519 CIRBP-AS1Q8TBR5 109 aa6.77□□□□□ -1.33
VPS4B-207ENST00000591519 CHCHD5Q9BSY4 110 aa6.77□□□□□ -1.33
VPS4B-207ENST00000591519 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 CAMPP49913 170 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 GAGE6Q13070 117 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 C14orf177Q52M58 125 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 MRPL54Q6P161 138 aaKnown RBP6.76□□□□□ -1.33
VPS4B-207ENST00000591519 NTM-AS1Q6ZSK4 140 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 COMMD7Q86VX2 200 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 AMN1Q8IY45 258 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 NAT8BQ9UHF3 227 aa6.76□□□□□ -1.33
VPS4B-207ENST00000591519 FAM231BA6NCW3 169 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 F8W036 122 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 SMKR1H3BMG3 65 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 GAS8-AS1O95177 125 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 NCR2O95944 276 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 PKIAP61925 76 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 TMEM97Q5BJF2 176 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 C1orf43Q9BWL3 253 aa6.75□□□□□ -1.33
VPS4B-207ENST00000591519 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 MIAQ16674 131 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 MPV17L2Q567V2 206 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 DGAT2L7PQ6IED9 249 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 PRR34Q9NV39 138 aa6.74□□□□□ -1.33
VPS4B-207ENST00000591519 TMEM218A2RU14 115 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 PPP1R2P9O14990 202 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 OXTP01178 125 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 ANGP03950 147 aaKnown RBP6.73□□□□□ -1.33
VPS4B-207ENST00000591519 ADCYAP1P18509 176 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 RAB4AP20338 218 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 COTL1Q14019 142 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 KRTAP26-1Q6PEX3 210 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 UQCC3Q6UW78 93 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 CLPSL2Q6UWE3 100 aa6.73□□□□□ -1.33
VPS4B-207ENST00000591519 USP17L23D6RBM5 183 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms