RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SAP30O75446 220 aa13.88□□□□□ -0.19
PRKCSH-209ENST00000589838 NDUFA7O95182 113 aa13.88□□□□□ -0.19
PRKCSH-209ENST00000589838 HILS1P60008 231 aa13.88□□□□□ -0.19
PRKCSH-209ENST00000589838 AMELXQ99217 191 aa13.88□□□□□ -0.19
PRKCSH-209ENST00000589838 SPANXB1Q9NS25 103 aaPredicted RBP13.88□□□□□ -0.19
PRKCSH-209ENST00000589838 A0A0J9YY99 117 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 AZU1P20160 251 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 TLN2Q9Y4G6 2542 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 IGHV3OR16-12A0A075B7B8 117 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 COTL1Q14019 142 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 OCIAD2Q56VL3 154 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
PRKCSH-209ENST00000589838 ZNF22P17026 224 aaPredicted RBP13.86□□□□□ -0.19
PRKCSH-209ENST00000589838 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
PRKCSH-209ENST00000589838 CHCHD7Q9BUK0 85 aa13.85□□□□□ -0.19
PRKCSH-209ENST00000589838 IGLV1-51P01701 117 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 TSPEAR-AS2P59090 65 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 RRN3P1Q2M238 152 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 SLC25A29Q8N8R3 303 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 TMEM263Q8WUH6 116 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 FLNAP21333 2647 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 SONP18583 2426 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 TRGV1A0A0A0MS02 117 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 K7ERU9 68 aa13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 MRPS36P82909 103 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-209ENST00000589838 RBX1P62877 108 aa13.82□□□□□ -0.2
PRKCSH-209ENST00000589838 UBE2D4Q9Y2X8 147 aa13.82□□□□□ -0.2
PRKCSH-209ENST00000589838 C1QTNF4Q9BXJ3 329 aa13.82□□□□□ -0.2
PRKCSH-209ENST00000589838 Q9UF83 564 aa13.82□□□□□ -0.2
PRKCSH-209ENST00000589838 TRBV10-1A0A0K0K1A3 114 aa13.81□□□□□ -0.2
PRKCSH-209ENST00000589838 UBE2D1P51668 147 aa13.81□□□□□ -0.2
PRKCSH-209ENST00000589838 PDZD2O15018 2839 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 TRAV4A0A0B4J268 109 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 TINCRA0A1B0GVN0 87 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 FAM104AQ969W3 186 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 TIMM21Q9BVV7 248 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 TENM4Q6N022 2769 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 WNK1Q9H4A3 2382 aa13.8□□□□□ -0.2
PRKCSH-209ENST00000589838 CCDC168Q8NDH2 2452 aa13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 ADARB2-AS1A8MUL3 147 aa13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 IGHV3-30P01768 117 aa13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 IGHV3-30-5P0DP03 117 aa13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 CEMP1Q6PRD7 247 aaPredicted RBP13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 C16orf74Q96GX8 76 aa13.79□□□□□ -0.2
PRKCSH-209ENST00000589838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-209ENST00000589838 IGHV3-38A0A0C4DH36 116 aa13.78□□□□□ -0.2
PRKCSH-209ENST00000589838 IGKV2-29A2NJV5 120 aaPredicted RBP13.78□□□□□ -0.2
PRKCSH-209ENST00000589838 K7EQD1 137 aa13.78□□□□□ -0.2
PRKCSH-209ENST00000589838 CIDEAO60543 219 aa13.78□□□□□ -0.2
PRKCSH-209ENST00000589838 ZNF469Q96JG9 3925 aaPredicted RBP13.77□□□□□ -0.21
PRKCSH-209ENST00000589838 SMAGPQ0VAQ4 97 aa13.77□□□□□ -0.21
PRKCSH-209ENST00000589838 DGAT2L7PQ6IED9 249 aa13.77□□□□□ -0.21
PRKCSH-209ENST00000589838 PGPEP1Q9NXJ5 209 aa13.77□□□□□ -0.21
PRKCSH-209ENST00000589838 RNF151Q2KHN1 245 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 Q6ZTI0 123 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 DAZ4Q86SG3 579 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 NDUFA11Q86Y39 141 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 DAZ3Q9NR90 486 aaKnown RBP13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 C19orf73Q9NVV2 129 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 TMEM238C9JI98 176 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 F8W1H4 67 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 GIG44P09565 113 aaPredicted RBP13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 IGHV3-30-3P0DP02 117 aa13.76□□□□□ -0.21
PRKCSH-209ENST00000589838 IGHV3-64A0A075B6Q5 118 aa13.75□□□□□ -0.21
PRKCSH-209ENST00000589838 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
PRKCSH-209ENST00000589838 NOP10Q9NPE3 64 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-209ENST00000589838 RPL35AP18077 110 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 LYRM7Q5U5X0 104 aa13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 Q6ZUT4 128 aa13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 GEMIN7Q9H840 131 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 AKAP9Q99996 3911 aa13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 APOMO95445 188 aa13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 RNASE13Q5GAN3 156 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-209ENST00000589838 TIRAPP58753 221 aa13.73□□□□□ -0.21
PRKCSH-209ENST00000589838 RPL24P83731 157 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-209ENST00000589838 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
PRKCSH-209ENST00000589838 VPS25Q9BRG1 176 aa13.72□□□□□ -0.21
PRKCSH-209ENST00000589838 A0A0J9YXY3 114 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 TSPAN13O95857 204 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 PF4P02776 101 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 CFC1BP0CG36 223 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 CFC1P0CG37 223 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 UBE2D3P61077 147 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 UBE2D2P62837 147 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 CSNK1G2-AS1Q8NCQ2 148 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 VSIG2Q96IQ7 327 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 WFDC10AQ9H1F0 79 aa13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 CSDC2Q9Y534 153 aaKnown RBP13.71□□□□□ -0.21
PRKCSH-209ENST00000589838 NBPF19A0A087WUL8 3843 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 TRGV2A0A075B6R0 118 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 H3BMG7 143 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 GAGE13Q4V321 117 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 C10orf126Q8N4M7 172 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 SMR3AQ99954 134 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 PRO1854Q9UHT4 67 aa13.7□□□□□ -0.22
PRKCSH-209ENST00000589838 PLAC8L1A1L4L8 177 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms