RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
TPM4-209ENST00000588483 TMEM191AQ9H0A3 160 aa6.91□□□□□ -1.3
TPM4-209ENST00000588483 NAT8Q9UHE5 227 aa6.91□□□□□ -1.3
TPM4-209ENST00000588483 TRAV26-2A0A0B4J265 109 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 NCR2O95944 276 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
TPM4-209ENST00000588483 COTL1Q14019 142 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 C20orf203Q8NBC4 194 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 BORCS7Q96B45 105 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 TMEM243Q9BU79 118 aa6.9□□□□□ -1.3
TPM4-209ENST00000588483 GAGE6Q13070 117 aa6.89□□□□□ -1.31
TPM4-209ENST00000588483 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
TPM4-209ENST00000588483 Q6ZSA8 131 aa6.89□□□□□ -1.31
TPM4-209ENST00000588483 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
TPM4-209ENST00000588483 RPL39LQ96EH5 51 aaKnown RBP6.89□□□□□ -1.31
TPM4-209ENST00000588483 H7C423 109 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 LECT2O14960 151 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 C14orf177Q52M58 125 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 LINC00269Q8N2A0 174 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 NUP35Q8NFH5 326 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 RNF185Q96GF1 192 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 NAT8BQ9UHF3 227 aa6.88□□□□□ -1.31
TPM4-209ENST00000588483 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 TRAV8-4A0A0B4J246 113 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 SMIM27A0A1W2PRY6 76 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 SDHAF1A6NFY7 115 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 RAB4AP20338 218 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 AMTP48728 403 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 REG3AQ06141 175 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 ADIRFQ15847 76 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 MRAP2Q96G30 205 aa6.87□□□□□ -1.31
TPM4-209ENST00000588483 TRBV27A0A0K0K1C4 114 aa6.86□□□□□ -1.31
TPM4-209ENST00000588483 A0A1B0GW15 77 aa6.86□□□□□ -1.31
TPM4-209ENST00000588483 UBE2L6O14933 153 aa6.86□□□□□ -1.31
TPM4-209ENST00000588483 POLR2KP53803 58 aaKnown RBP6.86□□□□□ -1.31
TPM4-209ENST00000588483 RIGQ13278 110 aa6.86□□□□□ -1.31
TPM4-209ENST00000588483 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
TPM4-209ENST00000588483 I3L3M4 83 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 GAS8-AS1O95177 125 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 PPP1R17O96001 155 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 APCSP02743 223 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 ESDP10768 282 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 AMN1Q8IY45 258 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
TPM4-209ENST00000588483 SRRM2Q9UQ35 2752 aaKnown RBP6.84□□□□□ -1.31
TPM4-209ENST00000588483 EPM2AB3EWF7 344 aa6.84□□□□□ -1.31
TPM4-209ENST00000588483 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
TPM4-209ENST00000588483 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
TPM4-209ENST00000588483 RPS10P46783 165 aaKnown RBP6.84□□□□□ -1.31
TPM4-209ENST00000588483 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
TPM4-209ENST00000588483 ST20Q9HBF5 79 aa6.84□□□□□ -1.31
TPM4-209ENST00000588483 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 TSHBP01222 138 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 HLA-DQA1P01909 254 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 FAM104BQ5XKR9 115 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 DGAT2L7PQ6IED9 249 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 NRACQ8N912 160 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 CLRN3Q8NCR9 226 aa6.83□□□□□ -1.32
TPM4-209ENST00000588483 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 TRBV24-1A0A075B6N3 115 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 LINC00862A6NCI5 91 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 PRSS1P07477 247 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 FGF6P10767 208 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 PMCHP20382 165 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 RAB14P61106 215 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
TPM4-209ENST00000588483 PNRC1Q12796 327 aaPredicted RBP6.82□□□□□ -1.32
TPM4-209ENST00000588483 CLLU1Q5K131 121 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 MRPL52Q86TS9 123 aaKnown RBP6.82□□□□□ -1.32
TPM4-209ENST00000588483 DEFB104AQ8WTQ1 72 aa6.82□□□□□ -1.32
TPM4-209ENST00000588483 IGLV10-54A0A075B6I4 117 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.81□□□□□ -1.32
TPM4-209ENST00000588483 IGKV2-29A2NJV5 120 aaPredicted RBP6.81□□□□□ -1.32
TPM4-209ENST00000588483 PPP1R2P9O14990 202 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 S100A8P05109 93 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
TPM4-209ENST00000588483 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
TPM4-209ENST00000588483 HBBP68871 147 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 MRPL51Q4U2R6 128 aaKnown RBP6.81□□□□□ -1.32
TPM4-209ENST00000588483 Q5VSD8 79 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 AMMECR1LQ6DCA0 310 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 ATP5L2Q7Z4Y8 100 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 TMEM242Q9NWH2 141 aa6.81□□□□□ -1.32
TPM4-209ENST00000588483 C7orf77A4D0Y5 90 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 SMKR1H3BMG3 65 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 VCYO14598 125 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 C9orf163Q8N9P6 203 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 OR5A1Q8NGJ0 315 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
TPM4-209ENST00000588483 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
TPM4-209ENST00000588483 F8W036 122 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 PHOX2AO14813 284 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 CAMPP49913 170 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 HAMPP81172 84 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 LINC01620Q4KN68 170 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 RNASEKQ6P5S7 137 aaKnown RBP6.79□□□□□ -1.32
TPM4-209ENST00000588483 CHAC1Q9BUX1 264 aa6.79□□□□□ -1.32
TPM4-209ENST00000588483 FAM229AH3BQW9 127 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 TCAPO15273 167 aa6.78□□□□□ -1.32
TPM4-209ENST00000588483 PPBPP02775 128 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms