RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 FER1L6-AS1Q8NA97 138 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 C11orf52Q96A22 123 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 DPH3Q96FX2 82 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 A0A1B0GV50 99 aa8.54□□□□□ -1.04
CLPTM1-208ENST00000588274 ARPC5O15511 151 aa8.54□□□□□ -1.04
CLPTM1-208ENST00000588274 TMUB2Q71RG4 321 aa8.54□□□□□ -1.04
CLPTM1-208ENST00000588274 SFT2D1Q8WV19 159 aa8.54□□□□□ -1.04
CLPTM1-208ENST00000588274 AMTP48728 403 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 SULT1A2P50226 295 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 FOXI1Q12951 378 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 LYPD6BQ8NI32 183 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 FAM213BQ8TBF2 198 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 CHCHD10Q8WYQ3 142 aaPredicted RBP8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 NIT2Q9NQR4 276 aa8.53□□□□□ -1.04
CLPTM1-208ENST00000588274 PFDN1O60925 122 aa8.52□□□□□ -1.05
CLPTM1-208ENST00000588274 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
CLPTM1-208ENST00000588274 TPPP3Q9BW30 176 aa8.52□□□□□ -1.05
CLPTM1-208ENST00000588274 DPH3P1Q9H4G8 78 aa8.52□□□□□ -1.05
CLPTM1-208ENST00000588274 TRBV20OR9-2A0A075B6H5 130 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 NTF3P20783 257 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 CTRLP40313 264 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 CACNG7P62955 275 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 Q6ZNX1 250 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
CLPTM1-208ENST00000588274 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 SMLR1H3BR10 107 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 CCL20P78556 96 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 COTL1Q14019 142 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 KCNRGQ8N5I3 272 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 GATD1Q8NB37 220 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 CNFNQ9BYD5 112 aa8.5□□□□□ -1.05
CLPTM1-208ENST00000588274 TRAV26-2A0A0B4J265 109 aa8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 UMAD1C9J7I0 102 aa8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 UBE2L6O14933 153 aa8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 RPS20P60866 119 aaKnown RBP8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 ZNF345Q14585 488 aa8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 REG3GQ6UW15 175 aa8.49□□□□□ -1.05
CLPTM1-208ENST00000588274 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.48□□□□□ -1.05
CLPTM1-208ENST00000588274 IGKV2-29A2NJV5 120 aaPredicted RBP8.48□□□□□ -1.05
CLPTM1-208ENST00000588274 C9orf62Q8N4C0 152 aa8.48□□□□□ -1.05
CLPTM1-208ENST00000588274 LINC00526Q96FQ7 95 aa8.48□□□□□ -1.05
CLPTM1-208ENST00000588274 F2Z2F3 143 aa8.47□□□□□ -1.05
CLPTM1-208ENST00000588274 TRGC1P0CF51 173 aa8.47□□□□□ -1.05
CLPTM1-208ENST00000588274 Q6ZRP5 223 aa8.47□□□□□ -1.05
CLPTM1-208ENST00000588274 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
CLPTM1-208ENST00000588274 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
CLPTM1-208ENST00000588274 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
CLPTM1-208ENST00000588274 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
CLPTM1-208ENST00000588274 FGF6P10767 208 aa8.46□□□□□ -1.06
CLPTM1-208ENST00000588274 LINC00474Q9P2X8 69 aa8.46□□□□□ -1.06
CLPTM1-208ENST00000588274 FAM231BA6NCW3 169 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 NCR2O95944 276 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 OR5A1Q8NGJ0 315 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 CARD19Q96LW7 228 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 MANBALQ9NQG1 85 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 GNG13Q9P2W3 67 aa8.45□□□□□ -1.06
CLPTM1-208ENST00000588274 TRAV1-1A0A0B4J248 108 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 LINC00959A0A1B0GUT2 108 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 H7C423 109 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 BCL2L11O43521 198 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 XCL1P47992 114 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 PTTG1IPP53801 180 aa8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 FOXA3P55318 350 aaPredicted RBP8.44□□□□□ -1.06
CLPTM1-208ENST00000588274 CCL25O15444 150 aa8.43□□□□□ -1.06
CLPTM1-208ENST00000588274 IFNA1P01562 189 aa8.43□□□□□ -1.06
CLPTM1-208ENST00000588274 GNG4P50150 75 aa8.43□□□□□ -1.06
CLPTM1-208ENST00000588274 AMMECR1LQ6DCA0 310 aa8.43□□□□□ -1.06
CLPTM1-208ENST00000588274 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 A0A1W2PNN7 141 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 APCSP02743 223 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 ESDP10768 282 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 RNASEKQ6P5S7 137 aaKnown RBP8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 NUDT10Q8NFP7 164 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 NUDT11Q96G61 164 aa8.42□□□□□ -1.06
CLPTM1-208ENST00000588274 FAT4Q6V0I7 4981 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 XKRY2A2RUG3 117 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 K7EN84 100 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 TSHBP01222 138 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 SYCNQ0VAF6 134 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 PSORS1C2Q9UIG4 136 aa8.41□□□□□ -1.06
CLPTM1-208ENST00000588274 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
CLPTM1-208ENST00000588274 HMSDA8MTL9 139 aa8.4□□□□□ -1.06
CLPTM1-208ENST00000588274 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.06
CLPTM1-208ENST00000588274 TWIST1Q15672 202 aa8.4□□□□□ -1.06
CLPTM1-208ENST00000588274 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
CLPTM1-208ENST00000588274 CAMPP49913 170 aa8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 RGS21Q2M5E4 152 aa8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 CD164L2Q6UWJ8 174 aa8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 MRPL52Q86TS9 123 aaKnown RBP8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 RPP21Q9H633 154 aaKnown RBP8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 CDC42SE2Q9NRR3 84 aa8.39□□□□□ -1.07
CLPTM1-208ENST00000588274 IGLV4-69A0A075B6H9 119 aa8.38□□□□□ -1.07
CLPTM1-208ENST00000588274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.38□□□□□ -1.07
CLPTM1-208ENST00000588274 PDE6DO43924 150 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms