RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 UBE2WQ96B02 151 aa6.74□□□□□ -1.33
TPM4-207ENST00000588032 ANAPC16Q96DE5 110 aa6.74□□□□□ -1.33
TPM4-207ENST00000588032 RNF185Q96GF1 192 aa6.74□□□□□ -1.33
TPM4-207ENST00000588032 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 H7C423 109 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 I3L3M4 83 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 UBE2L6O14933 153 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 MT-ND4LP03901 98 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 AMTP48728 403 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 RBX1P62877 108 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 GAGE6Q13070 117 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 AMN1Q8IY45 258 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 NTN5Q8WTR8 489 aaPredicted RBP6.73□□□□□ -1.33
TPM4-207ENST00000588032 RPL39LQ96EH5 51 aaKnown RBP6.73□□□□□ -1.33
TPM4-207ENST00000588032 ST20Q9HBF5 79 aa6.73□□□□□ -1.33
TPM4-207ENST00000588032 IGKV2D-24A0A075B6R9 120 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 LINC00862A6NCI5 91 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 F8W036 122 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 PMCHP20382 165 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 MIAQ16674 131 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 FAM104BQ5XKR9 115 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 ENHOQ6UWT2 76 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 Q8N814 137 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 Q8N976 141 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 C1orf43Q9BWL3 253 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 PRR34Q9NV39 138 aa6.72□□□□□ -1.33
TPM4-207ENST00000588032 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 CAMPP49913 170 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 HBBP68871 147 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.34
TPM4-207ENST00000588032 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 TRAV8-4A0A0B4J246 113 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 TRBV27A0A0K0K1C4 114 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 A0A1B0GXF2 115 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 TMEM218A2RU14 115 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 VCYO14598 125 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 APCSP02743 223 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 POLR2KP53803 58 aaKnown RBP6.7□□□□□ -1.34
TPM4-207ENST00000588032 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
TPM4-207ENST00000588032 LINC00269Q8N2A0 174 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 MAPKAPK5-AS1Q8N8E1 139 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 TMEM70Q9BUB7 260 aa6.7□□□□□ -1.34
TPM4-207ENST00000588032 TRBV24-1A0A075B6N3 115 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 IGLV5-52A0A0A0MRZ9 124 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 GAS8-AS1O95177 125 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 PPBPP02775 128 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 RPS10P46783 165 aaKnown RBP6.69□□□□□ -1.34
TPM4-207ENST00000588032 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
TPM4-207ENST00000588032 REG3AQ06141 175 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
TPM4-207ENST00000588032 AMMECR1LQ6DCA0 310 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 C20orf203Q8NBC4 194 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 BAALCQ8WXS3 180 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 IMMP2LQ96T52 175 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 C20orf78Q9BR46 151 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 SEC11CQ9BY50 192 aa6.69□□□□□ -1.34
TPM4-207ENST00000588032 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 TCAPO15273 167 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 ESDP10768 282 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 ZNF25P17030 456 aaPredicted RBP6.68□□□□□ -1.34
TPM4-207ENST00000588032 GCSHP23434 173 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 CKS2P33552 79 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 C14orf177Q52M58 125 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 NRACQ8N912 160 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 BTF3L4Q96K17 158 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 KIR2DL4Q99706 377 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 CTDSP1Q9GZU7 261 aa6.68□□□□□ -1.34
TPM4-207ENST00000588032 PHOX2AO14813 284 aa6.67□□□□□ -1.34
TPM4-207ENST00000588032 TSHBP01222 138 aa6.67□□□□□ -1.34
TPM4-207ENST00000588032 FCER1GP30273 86 aa6.67□□□□□ -1.34
TPM4-207ENST00000588032 RPL32P62910 135 aaKnown RBP6.67□□□□□ -1.34
TPM4-207ENST00000588032 SMAGPQ0VAQ4 97 aa6.67□□□□□ -1.34
TPM4-207ENST00000588032 COMMD7Q86VX2 200 aa6.67□□□□□ -1.34
TPM4-207ENST00000588032 SMKR1H3BMG3 65 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 LECT2O14960 151 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 TNFRSF6BO95407 300 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 FGF6P10767 208 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 ADCYAP1P18509 176 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 WFDC2Q14508 124 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 RNASEKQ6P5S7 137 aaKnown RBP6.66□□□□□ -1.34
TPM4-207ENST00000588032 CLPSL2Q6UWE3 100 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 TMEM101Q96IK0 257 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 TMEM242Q9NWH2 141 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 HECTD4Q9Y4D8 3996 aa6.66□□□□□ -1.34
TPM4-207ENST00000588032 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.65□□□□□ -1.34
TPM4-207ENST00000588032 TRAV9-1A0A075B6T8 112 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 IGKV2-29A2NJV5 120 aaPredicted RBP6.65□□□□□ -1.34
TPM4-207ENST00000588032 C7orf77A4D0Y5 90 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 D6R8Y8 96 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 FUSP35637 526 aaKnown RBP eCLIP6.65□□□□□ -1.34
TPM4-207ENST00000588032 KRTAP26-1Q6PEX3 210 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
TPM4-207ENST00000588032 ORMDL3Q8N138 153 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 TMEM18Q96B42 140 aa6.65□□□□□ -1.34
TPM4-207ENST00000588032 LAMTOR2Q9Y2Q5 125 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms