RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	DEFB104A	Q8WTQ1	72 aa		11.42	□□□□□ -0.58
TCF3-208	ENST00000586318	LINC00476	Q8WZB0	136 aa		11.41	□□□□□ -0.58
TCF3-208	ENST00000586318		K7EMI3	77 aa		11.4	□□□□□ -0.58
TCF3-208	ENST00000586318	IFI27	P40305	119 aa	Predicted RBP	11.4	□□□□□ -0.58
TCF3-208	ENST00000586318	WFDC10B	Q8IUB3	73 aa		11.4	□□□□□ -0.58
TCF3-208	ENST00000586318	PRSS3P2	Q8NHM4	247 aa		11.4	□□□□□ -0.58
TCF3-208	ENST00000586318	TMEM243	Q9BU79	118 aa		11.4	□□□□□ -0.58
TCF3-208	ENST00000586318	ESD	P10768	282 aa		11.39	□□□□□ -0.59
TCF3-208	ENST00000586318	CHCHD7	Q9BUK0	85 aa		11.39	□□□□□ -0.59
TCF3-208	ENST00000586318	LY6G6C	O95867	125 aa		11.38	□□□□□ -0.59
TCF3-208	ENST00000586318	CHCHD5	Q9BSY4	110 aa		11.38	□□□□□ -0.59
TCF3-208	ENST00000586318	TENM2	Q9NT68	2774 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	LINC01546	A6NGU7	62 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318		H7C423	109 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	SIVA1	O15304	175 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	PKIA	P61925	76 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	FA2H	Q7L5A8	372 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	NIT1	Q86X76	327 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318		Q9H8V8	135 aa		11.37	□□□□□ -0.59
TCF3-208	ENST00000586318	UBE2L6	O14933	153 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318	DNAH10OS	P0CZ25	163 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318	RAB5B	P61020	215 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318		Q0VG73	95 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318	LAGE3	Q14657	143 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318	ORMDL2	Q53FV1	153 aa		11.36	□□□□□ -0.59
TCF3-208	ENST00000586318	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	C1orf196	B1AJZ1	125 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	LINC00614	P0C842	121 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	GAGE6	Q13070	117 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	LINC01556	Q5JQF7	62 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	C20orf203	Q8NBC4	194 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	URB1-AS1	Q96HZ7	61 aa		11.35	□□□□□ -0.59
TCF3-208	ENST00000586318	LCE6A	A0A183	80 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	TMEM262	E9PQX1	116 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BK	O60814	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BJ	P06899	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BO	P23527	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BB	P33778	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BD	P58876	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BC	P62807	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST2H2BE	Q16778	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BH	Q93079	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	TMEM18	Q96B42	140 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BN	Q99877	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	HIST1H2BM	Q99879	126 aa		11.34	□□□□□ -0.59
TCF3-208	ENST00000586318	BAGE3	Q86Y29	109 aa		11.33	□□□□□ -0.6
TCF3-208	ENST00000586318	AP5S1	Q9NUS5	200 aa		11.33	□□□□□ -0.6
TCF3-208	ENST00000586318	ALMS1	Q8TCU4	4167 aa		11.33	□□□□□ -0.6
TCF3-208	ENST00000586318		A0A087WX48	190 aa		11.32	□□□□□ -0.6
TCF3-208	ENST00000586318		A0A1B0GUV1	79 aa		11.32	□□□□□ -0.6
TCF3-208	ENST00000586318	G0S2	P27469	103 aa		11.32	□□□□□ -0.6
TCF3-208	ENST00000586318	MPV17L2	Q567V2	206 aa		11.32	□□□□□ -0.6
TCF3-208	ENST00000586318	RNASEK	Q6P5S7	137 aa	Known RBP	11.32	□□□□□ -0.6
TCF3-208	ENST00000586318	CHCHD1	Q96BP2	118 aa	Known RBP	11.32	□□□□□ -0.6
TCF3-208	ENST00000586318		K7EP13	123 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	IGHV3-30	P01768	117 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	IGHV3-33	P01772	117 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	IGHV3-30-3	P0DP02	117 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	IGHV3-30-5	P0DP03	117 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	FGF6	P10767	208 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	RBX1	P62877	108 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	SMAGP	Q0VAQ4	97 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	MRPL52	Q86TS9	123 aa	Known RBP	11.31	□□□□□ -0.6
TCF3-208	ENST00000586318		Q8N3U1	123 aa		11.31	□□□□□ -0.6
TCF3-208	ENST00000586318	TRAV9-2	A0A087WT02	112 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	ZNF25	P17030	456 aa	Predicted RBP	11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	RPL39	P62891	51 aa	Known RBP	11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	AMMECR1L	Q6DCA0	310 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	C2orf66	Q6UXQ4	117 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	TIMM21	Q9BVV7	248 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	CYSLTR1	Q9Y271	337 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	UBE2D4	Q9Y2X8	147 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	VPS13D	Q5THJ4	4388 aa		11.3	□□□□□ -0.6
TCF3-208	ENST00000586318	NBDY	A0A0U1RRE5	68 aa		11.29	□□□□□ -0.6
TCF3-208	ENST00000586318	BTF3	P20290	206 aa	Known RBP	11.29	□□□□□ -0.6
TCF3-208	ENST00000586318	TTC32	Q5I0X7	151 aa		11.29	□□□□□ -0.6
TCF3-208	ENST00000586318	C10orf126	Q8N4M7	172 aa		11.29	□□□□□ -0.6
TCF3-208	ENST00000586318		Q8N976	141 aa		11.29	□□□□□ -0.6
TCF3-208	ENST00000586318	LINC01549	A6NIU2	74 aa		11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	SERF1A	O75920	110 aa		11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	TOMM6	Q96B49	74 aa		11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	TMEM101	Q96IK0	257 aa		11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	SPANXA1	Q9NS26	97 aa		11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	CSDC2	Q9Y534	153 aa	Known RBP	11.28	□□□□□ -0.6
TCF3-208	ENST00000586318	IGLV4-60	A0A075B6I1	120 aa		11.27	□□□□□ -0.61
TCF3-208	ENST00000586318	LINC00310	P59036	64 aa		11.27	□□□□□ -0.61
TCF3-208	ENST00000586318	OR5A1	Q8NGJ0	315 aa		11.27	□□□□□ -0.61
TCF3-208	ENST00000586318	PYGO1	Q9Y3Y4	419 aa		11.27	□□□□□ -0.61
TCF3-208	ENST00000586318	DNAH1	Q9P2D7	4330 aa		11.27	□□□□□ -0.61
TCF3-208	ENST00000586318	LYST	Q99698	3801 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318		A0A096LNJ9	63 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	HSBP1	O75506	76 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	HBD	P02042	147 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	ANG	P03950	147 aa	Known RBP	11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	DGAT2L7P	Q6IED9	249 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	KRTAP1-5	Q9BYS1	174 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	KLK12	Q9UKR0	248 aa		11.26	□□□□□ -0.61
TCF3-208	ENST00000586318	IBA57-AS1	B1ANH7	110 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms