RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 COMMD7Q86VX2 200 aa6.73□□□□□ -1.33
GGA3-219ENST00000584550 Q8N3U1 123 aa6.73□□□□□ -1.33
GGA3-219ENST00000584550 CNFNQ9BYD5 112 aa6.73□□□□□ -1.33
GGA3-219ENST00000584550 A0A1B0GUT8 65 aa6.72□□□□□ -1.33
GGA3-219ENST00000584550 LINC01556Q5JQF7 62 aa6.72□□□□□ -1.33
GGA3-219ENST00000584550 RASL11AQ6T310 242 aa6.72□□□□□ -1.33
GGA3-219ENST00000584550 NUP35Q8NFH5 326 aa6.72□□□□□ -1.33
GGA3-219ENST00000584550 GFRA4Q9GZZ7 299 aa6.72□□□□□ -1.33
GGA3-219ENST00000584550 FAM231BA6NCW3 169 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 TMEM262E9PQX1 116 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 HNRNPA3P51991 378 aaKnown RBP6.71□□□□□ -1.34
GGA3-219ENST00000584550 RIGQ13278 110 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
GGA3-219ENST00000584550 CIRBP-AS1Q8TBR5 109 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 DNAJC30Q96LL9 226 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 NIT2Q9NQR4 276 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
GGA3-219ENST00000584550 NAT8BQ9UHF3 227 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 URGCP-MRPS24S4R325 110 aa6.71□□□□□ -1.34
GGA3-219ENST00000584550 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 KCNIP4Q6PIL6 250 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 NIT1Q86X76 327 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 GATD1Q8NB37 220 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 RPL39LQ96EH5 51 aaKnown RBP6.7□□□□□ -1.34
GGA3-219ENST00000584550 CHCHD5Q9BSY4 110 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 CHAC1Q9BUX1 264 aa6.7□□□□□ -1.34
GGA3-219ENST00000584550 A0A087WX48 190 aa6.69□□□□□ -1.34
GGA3-219ENST00000584550 SMIM27A0A1W2PRY6 76 aa6.69□□□□□ -1.34
GGA3-219ENST00000584550 CAMPP49913 170 aa6.69□□□□□ -1.34
GGA3-219ENST00000584550 NTM-AS1Q6ZSK4 140 aa6.69□□□□□ -1.34
GGA3-219ENST00000584550 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 RPL37AP61513 92 aaKnown RBP6.68□□□□□ -1.34
GGA3-219ENST00000584550 GAGE6Q13070 117 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 TMEM97Q5BJF2 176 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
GGA3-219ENST00000584550 AMN1Q8IY45 258 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 TMEM191AQ9H0A3 160 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 KLK12Q9UKR0 248 aa6.68□□□□□ -1.34
GGA3-219ENST00000584550 TRBV25-1A0A075B6N4 114 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 IGHV1-24A0A0C4DH33 117 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 TMEM218A2RU14 115 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 F8W036 122 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 PPP1R2P9O14990 202 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 GAS8-AS1O95177 125 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 MT-ND4LP03901 98 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 RAB4AP20338 218 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 PNRC1Q12796 327 aaPredicted RBP6.67□□□□□ -1.34
GGA3-219ENST00000584550 UQCC3Q6UW78 93 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 RNF185Q96GF1 192 aa6.67□□□□□ -1.34
GGA3-219ENST00000584550 NCR2O95944 276 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 ANGP03950 147 aaKnown RBP6.66□□□□□ -1.34
GGA3-219ENST00000584550 COTL1Q14019 142 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 Q8N976 141 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 UBE2WQ96B02 151 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 TM2D2Q9BX73 214 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 TNXBP22105 4242 aa6.66□□□□□ -1.34
GGA3-219ENST00000584550 TRAV8-3A0A0A6YYJ7 113 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 SDHAF1A6NFY7 115 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 ADCYAP1P18509 176 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 PMCHP20382 165 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 AMTP48728 403 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 ELOBQ15370 118 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 IQCJQ1A5X6 159 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 ATRAIDQ6UW56 229 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 MRAP2Q96G30 205 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 ST20Q9HBF5 79 aa6.65□□□□□ -1.34
GGA3-219ENST00000584550 IGKV2D-24A0A075B6R9 120 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 A0A1B0GW15 77 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 UBE2L6O14933 153 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 S100A8P05109 93 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 RPS10P46783 165 aaKnown RBP6.64□□□□□ -1.35
GGA3-219ENST00000584550 PKIAP61925 76 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 RBX1P62877 108 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 HBBP68871 147 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 LAGE3Q14657 143 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 ANAPC16Q96DE5 110 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 CHCHD7Q9BUK0 85 aa6.64□□□□□ -1.35
GGA3-219ENST00000584550 CRPP02741 224 aa6.63□□□□□ -1.35
GGA3-219ENST00000584550 MRPL51Q4U2R6 128 aaKnown RBP6.63□□□□□ -1.35
GGA3-219ENST00000584550 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.62□□□□□ -1.35
GGA3-219ENST00000584550 TRBV6-5A0A0K0K1A5 114 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 A0A1B0GXF2 115 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 IGKV2-29A2NJV5 120 aaPredicted RBP6.62□□□□□ -1.35
GGA3-219ENST00000584550 I3L3M4 83 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 APCSP02743 223 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 CKS2P33552 79 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 ODF1Q14990 250 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 ENHOQ6UWT2 76 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 LINC00269Q8N2A0 174 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 RMI2Q96E14 147 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 SEC11CQ9BY50 192 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 TMEM242Q9NWH2 141 aa6.62□□□□□ -1.35
GGA3-219ENST00000584550 SCO1O75880 301 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms