RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 LAGE3Q14657 143 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 KCNIP4Q6PIL6 250 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 ATRAIDQ6UW56 229 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 KLK12Q9UKR0 248 aa10.98□□□□□ -0.65
RNF43-206ENST00000582293 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 A0A087WX48 190 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 TRBV27A0A0K0K1C4 114 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 D6R8Y8 96 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 TMEM262E9PQX1 116 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 I3L3M4 83 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 APOC3P02656 99 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 AMTP48728 403 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 TMEM243Q9BU79 118 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 Q9HAA7 133 aa10.97□□□□□ -0.65
RNF43-206ENST00000582293 NPYP01303 97 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 CKS2P33552 79 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.65
RNF43-206ENST00000582293 RBX1P62877 108 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 TMEM136Q6ZRR5 245 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 NFE4Q86UQ8 179 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 RPS10P5Q9NQ39 176 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 URGCP-MRPS24S4R325 110 aa10.96□□□□□ -0.65
RNF43-206ENST00000582293 TRAV9-1A0A075B6T8 112 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 TNFRSF6BO95407 300 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 ESDP10768 282 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 PMCHP20382 165 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 ENHOQ6UWT2 76 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 DNAH5Q8TE73 4624 aa10.95□□□□□ -0.66
RNF43-206ENST00000582293 IGLV4-60A0A075B6I1 120 aa10.94□□□□□ -0.66
RNF43-206ENST00000582293 PPP1R17O96001 155 aa10.94□□□□□ -0.66
RNF43-206ENST00000582293 PKHD1P08F94 4074 aa10.94□□□□□ -0.66
RNF43-206ENST00000582293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
RNF43-206ENST00000582293 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
RNF43-206ENST00000582293 SVBPQ8N300 66 aa10.93□□□□□ -0.66
RNF43-206ENST00000582293 MAPKAPK5-AS1Q8N8E1 139 aa10.93□□□□□ -0.66
RNF43-206ENST00000582293 C20orf78Q9BR46 151 aa10.93□□□□□ -0.66
RNF43-206ENST00000582293 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 LRCOL1A6NCL2 159 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 VCYO14598 125 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 APCSP02743 223 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 PPBPP02775 128 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 ANGP03950 147 aaKnown RBP10.92□□□□□ -0.66
RNF43-206ENST00000582293 PKIAP61925 76 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
RNF43-206ENST00000582293 ORMDL3Q8N138 153 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 PRR34Q9NV39 138 aa10.92□□□□□ -0.66
RNF43-206ENST00000582293 TRAV8-3A0A0A6YYJ7 113 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 PHOX2AO14813 284 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 SNAPINO95295 136 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 ELOBQ15370 118 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 PRELID3AQ96N28 172 aa10.91□□□□□ -0.66
RNF43-206ENST00000582293 A0A087WTM6 91 aa10.9□□□□□ -0.66
RNF43-206ENST00000582293 S100PP25815 95 aa10.9□□□□□ -0.66
RNF43-206ENST00000582293 LINC00269Q8N2A0 174 aa10.9□□□□□ -0.66
RNF43-206ENST00000582293 SMIM2Q9BVW6 85 aa10.9□□□□□ -0.66
RNF43-206ENST00000582293 TGIF2-C20orf24A0A0A6YYL0 155 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 PRSS47A8MTI9 375 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 WFDC2Q14508 124 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 KRTAP26-1Q6PEX3 210 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 CLPSL2Q6UWE3 100 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 YPEL4Q96NS1 127 aa10.89□□□□□ -0.67
RNF43-206ENST00000582293 H7C423 109 aa10.88□□□□□ -0.67
RNF43-206ENST00000582293 UBE2L6O14933 153 aa10.88□□□□□ -0.67
RNF43-206ENST00000582293 FGF6P10767 208 aa10.88□□□□□ -0.67
RNF43-206ENST00000582293 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
RNF43-206ENST00000582293 LRP1BQ9NZR2 4599 aa10.88□□□□□ -0.67
RNF43-206ENST00000582293 Q0VG73 95 aa10.87□□□□□ -0.67
RNF43-206ENST00000582293 KIR2DL4Q99706 377 aa10.87□□□□□ -0.67
RNF43-206ENST00000582293 GNB1LQ9BYB4 327 aa10.87□□□□□ -0.67
RNF43-206ENST00000582293 LAMTOR2Q9Y2Q5 125 aa10.87□□□□□ -0.67
RNF43-206ENST00000582293 IGKV2D-24A0A075B6R9 120 aa10.86□□□□□ -0.67
RNF43-206ENST00000582293 TCAPO15273 167 aa10.86□□□□□ -0.67
RNF43-206ENST00000582293 HLA-DQA1P01909 254 aa10.86□□□□□ -0.67
RNF43-206ENST00000582293 FUSP35637 526 aaKnown RBP eCLIP10.86□□□□□ -0.67
RNF43-206ENST00000582293 REG3AQ06141 175 aa10.86□□□□□ -0.67
RNF43-206ENST00000582293 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
RNF43-206ENST00000582293 MRPL52Q86TS9 123 aaKnown RBP10.86□□□□□ -0.67
RNF43-206ENST00000582293 PSCAO43653 123 aa10.85□□□□□ -0.67
RNF43-206ENST00000582293 CRPP02741 224 aa10.85□□□□□ -0.67
RNF43-206ENST00000582293 FCER1GP30273 86 aa10.85□□□□□ -0.67
RNF43-206ENST00000582293 MIAQ16674 131 aa10.85□□□□□ -0.67
RNF43-206ENST00000582293 TM2D2Q9BX73 214 aa10.85□□□□□ -0.67
RNF43-206ENST00000582293 LOC389332A0A1B0GUA5 103 aa10.84□□□□□ -0.67
RNF43-206ENST00000582293 RNASEKQ6P5S7 137 aaKnown RBP10.84□□□□□ -0.67
RNF43-206ENST00000582293 FAM104AQ969W3 186 aa10.84□□□□□ -0.67
RNF43-206ENST00000582293 KIAA1109Q2LD37 5005 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 ZNF25P17030 456 aaPredicted RBP10.83□□□□□ -0.68
RNF43-206ENST00000582293 RPL39P62891 51 aaKnown RBP10.83□□□□□ -0.68
RNF43-206ENST00000582293 COX19Q49B96 90 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 AMMECR1LQ6DCA0 310 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 BAALCQ8WXS3 180 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 RMI2Q96E14 147 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 C1orf43Q9BWL3 253 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 MRPL18Q9H0U6 180 aaKnown RBP10.83□□□□□ -0.68
RNF43-206ENST00000582293 MAP1LC3AQ9H492 121 aa10.83□□□□□ -0.68
RNF43-206ENST00000582293 UBE2D4Q9Y2X8 147 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms