RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 DGAT2L7PQ6IED9 249 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 UFSP1Q6NVU6 142 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 SLC25A34Q6PIV7 304 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 NEXN-AS1Q8NBZ9 246 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 OR11H2Q8NH07 326 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 ZNF479Q96JC4 524 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 TRBV7-3A0A075B6L6 115 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 M0R143 59 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 P0DMU3 169 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 FAM231AP0DMU4 169 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 FAM231CP0DMU5 169 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 IGLC3P0DOY3 106 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 ODF1Q14990 250 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 PMVKQ15126 192 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 PHLDA1Q8WV24 401 aaPredicted RBP6.66□□□□□ -1.34
SS18-220ENST00000582092 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 VCX2Q9H322 139 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 DKK2Q9UBU2 259 aa6.66□□□□□ -1.34
SS18-220ENST00000582092 GAGE12JA6NER3 117 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 F8VRH5 84 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 TSHBP01222 138 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 IGHV4-30-4P0DP06 118 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 HERVK_113P61574 105 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 GAGE1Q13065 139 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 GAGE4Q13068 117 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 GAGE5Q13069 117 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 DEFB135Q30KP9 77 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 GAGE13Q4V321 117 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 TMEM97Q5BJF2 176 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 Q6ZSN1 163 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 DAZ4Q86SG3 579 aaKnown RBP6.65□□□□□ -1.34
SS18-220ENST00000582092 C20orf203Q8NBC4 194 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 BAALCQ8WXS3 180 aa6.65□□□□□ -1.34
SS18-220ENST00000582092 DAZ3Q9NR90 486 aaKnown RBP6.65□□□□□ -1.34
SS18-220ENST00000582092 PRSS29PA6NIE9 313 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 LYRM9A8MSI8 78 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 UBE2L6O14933 153 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 MIFP14174 115 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 NMUP48645 174 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 RPL39P62891 51 aaKnown RBP6.64□□□□□ -1.35
SS18-220ENST00000582092 CTAG1AP78358 180 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 MRPL52Q86TS9 123 aaKnown RBP6.64□□□□□ -1.35
SS18-220ENST00000582092 STPG4Q8N801 248 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 ZMAT4Q9H898 229 aa6.64□□□□□ -1.35
SS18-220ENST00000582092 MRPL35Q9NZE8 188 aaKnown RBP6.64□□□□□ -1.35
SS18-220ENST00000582092 IGHV3-38A0A0C4DH36 116 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 TRBV6-4A0A1B0GX49 114 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 DAD1P61803 113 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 BATFQ16520 125 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 SLC25A29Q8N8R3 303 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 WWC2-AS2Q96NR7 200 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 C2orf88Q9BSF0 95 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 SPANXA1Q9NS26 97 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 HHLA3Q9XRX5 114 aa6.63□□□□□ -1.35
SS18-220ENST00000582092 CMYA5Q8N3K9 4069 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 TEX48A0A1B0GUV7 120 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 IGIPA6NJ69 53 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 NPSP0C0P6 89 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 SPART-AS1P0CW21 52 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 COX8AP10176 69 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 TCTAP57738 103 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 LBHQ53QV2 105 aaPredicted RBP6.62□□□□□ -1.35
SS18-220ENST00000582092 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 AMMECR1LQ6DCA0 310 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 RNF183Q96D59 192 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 TMEM101Q96IK0 257 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 CST9LQ9H4G1 147 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 MRPS16Q9Y3D3 137 aaKnown RBP6.62□□□□□ -1.35
SS18-220ENST00000582092 PYGO1Q9Y3Y4 419 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 X6R8D5 127 aa6.62□□□□□ -1.35
SS18-220ENST00000582092 PLAC8L1A1L4L8 177 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 A8MZ25 164 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 CRYBA4P53673 196 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 ANKRD39Q53RE8 183 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 TMEM170BQ5T4T1 132 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
SS18-220ENST00000582092 TRBV25-1A0A075B6N4 114 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.6□□□□□ -1.35
SS18-220ENST00000582092 IGHV4-28A0A0C4DH34 117 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 IGKV2-29A2NJV5 120 aaPredicted RBP6.6□□□□□ -1.35
SS18-220ENST00000582092 UBE2D3P61077 147 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 UBE2D2P62837 147 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 FHL2Q14192 279 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 TMEM243Q9BU79 118 aa6.6□□□□□ -1.35
SS18-220ENST00000582092 TRAV8-6A0A0B4J262 113 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 DEFB4AO15263 64 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 SIVA1O15304 175 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 PAX4O43316 350 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 ATP5G1P05496 136 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 GTSF1LQ9H1H1 148 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.35
SS18-220ENST00000582092 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
SS18-220ENST00000582092 IGLV4-3A0A075B6K6 122 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 H7C423 109 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 DLEU1O43261 78 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 GYPEP15421 78 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 HTN3P15516 51 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 HINT1P49773 126 aaPredicted RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms