RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 H0Y8G0 127 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 SPART-AS1P0CW21 52 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 G0S2P27469 103 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 DAD1P61803 113 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
SRSF1-204ENST00000581979 FHL2Q14192 279 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 CDPF1Q6NVV7 123 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
SRSF1-204ENST00000581979 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
SRSF1-204ENST00000581979 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
SRSF1-204ENST00000581979 TSHBP01222 138 aa8.87□□□□□ -0.99
SRSF1-204ENST00000581979 RHOHQ15669 191 aa8.87□□□□□ -0.99
SRSF1-204ENST00000581979 C2orf66Q6UXQ4 117 aa8.87□□□□□ -0.99
SRSF1-204ENST00000581979 TRBV7-3A0A075B6L6 115 aa8.86□□□□□ -0.99
SRSF1-204ENST00000581979 PHLDA1Q8WV24 401 aaPredicted RBP8.86□□□□□ -0.99
SRSF1-204ENST00000581979 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
SRSF1-204ENST00000581979 PRADC1Q9BSG0 188 aa8.86□□□□□ -0.99
SRSF1-204ENST00000581979 CELA1Q9UNI1 258 aa8.86□□□□□ -0.99
SRSF1-204ENST00000581979 IGHV3-38A0A0C4DH36 116 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 C20orf202A1L168 122 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 GAGE12JA6NER3 117 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 ATP5LO75964 103 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 GAGE1Q13065 139 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 GAGE4Q13068 117 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 GAGE5Q13069 117 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 GAGE13Q4V321 117 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 PET117Q6UWS5 81 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 Q8N976 141 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 CYSLTR1Q9Y271 337 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 A0A0J9YWU9 116 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 TEX48A0A1B0GUV7 120 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 S100A12P80511 92 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 SPATA12Q7Z6I5 190 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 SCGB3A1Q96QR1 104 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 HHLA3Q9XRX5 114 aa8.85□□□□□ -0.99
SRSF1-204ENST00000581979 LINC01549A6NIU2 74 aa8.84□□□□□ -0.99
SRSF1-204ENST00000581979 COTL1Q14019 142 aa8.84□□□□□ -0.99
SRSF1-204ENST00000581979 LOC100131303A0A0U1RQF7 123 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
SRSF1-204ENST00000581979 ATP5G1P05496 136 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 UBE2D3P61077 147 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 UBE2D2P62837 147 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 PRSS1P07477 247 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 RPL39P62891 51 aaKnown RBP8.83□□□□□ -1
SRSF1-204ENST00000581979 Q6ZN92 141 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 DAZ4Q86SG3 579 aaKnown RBP8.83□□□□□ -1
SRSF1-204ENST00000581979 DAZ3Q9NR90 486 aaKnown RBP8.83□□□□□ -1
SRSF1-204ENST00000581979 PRO0255Q9UI72 69 aa8.83□□□□□ -1
SRSF1-204ENST00000581979 HYDINQ4G0P3 5121 aa8.82□□□□□ -1
SRSF1-204ENST00000581979 CRYBA4P53673 196 aa8.82□□□□□ -1
SRSF1-204ENST00000581979 TEX43Q6ZNM6 134 aa8.82□□□□□ -1
SRSF1-204ENST00000581979 ERASQ7Z444 233 aa8.82□□□□□ -1
SRSF1-204ENST00000581979 C20orf203Q8NBC4 194 aa8.82□□□□□ -1
SRSF1-204ENST00000581979 C11orf68Q9H3H3 251 aaKnown RBP8.82□□□□□ -1
SRSF1-204ENST00000581979 NUPR2A6NF83 97 aa8.81□□□□□ -1
SRSF1-204ENST00000581979 LINC01545Q5VT33 79 aa8.81□□□□□ -1
SRSF1-204ENST00000581979 ATOH7Q8N100 152 aa8.81□□□□□ -1
SRSF1-204ENST00000581979 PMCHL2Q9BQD1 86 aa8.81□□□□□ -1
SRSF1-204ENST00000581979 F5H768 121 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 PAX4O43316 350 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 HTN3P15516 51 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 LGALS9CQ6DKI2 356 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 CHCHD7Q9BUK0 85 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 ALMS1Q8TCU4 4167 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 PLECQ15149 4684 aaKnown RBP8.8□□□□□ -1
SRSF1-204ENST00000581979 GYPEP15421 78 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 LCE2DQ5TA82 110 aaPredicted RBP8.8□□□□□ -1
SRSF1-204ENST00000581979 CEMP1Q6PRD7 247 aaPredicted RBP8.8□□□□□ -1
SRSF1-204ENST00000581979 TMEM141Q96I45 108 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 TIMM17AQ99595 171 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 VAMP8Q9BV40 100 aa8.8□□□□□ -1
SRSF1-204ENST00000581979 A0A0J9YY99 117 aa8.79□□□□□ -1
SRSF1-204ENST00000581979 IGIPA6NJ69 53 aa8.79□□□□□ -1
SRSF1-204ENST00000581979 C12orf74Q32Q52 190 aa8.79□□□□□ -1
SRSF1-204ENST00000581979 BAALCQ8WXS3 180 aa8.79□□□□□ -1
SRSF1-204ENST00000581979 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
SRSF1-204ENST00000581979 EPPK1P58107 5090 aaKnown RBP8.78□□□□□ -1
SRSF1-204ENST00000581979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.78□□□□□ -1
SRSF1-204ENST00000581979 IGKV2-29A2NJV5 120 aaPredicted RBP8.78□□□□□ -1
SRSF1-204ENST00000581979 LINC00694P0DN24 101 aa8.78□□□□□ -1
SRSF1-204ENST00000581979 PAM16Q9Y3D7 125 aa8.78□□□□□ -1
SRSF1-204ENST00000581979 ODF1Q14990 250 aa8.77□□□□□ -1
SRSF1-204ENST00000581979 GTSF1LQ9H1H1 148 aa8.77□□□□□ -1
SRSF1-204ENST00000581979 TRAV26-1A0A087WT03 109 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 A0A087WX48 190 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 TRAV12-1A0A0B4J245 112 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 NTM-AS1Q6ZSK4 140 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 ZNF664Q8N3J9 261 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 ATP6V0E2Q8NHE4 81 aa8.77□□□□□ -1.01
SRSF1-204ENST00000581979 KLK5Q9Y337 293 aaPredicted RBP8.77□□□□□ -1.01
SRSF1-204ENST00000581979 TRAV9-2A0A087WT02 112 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 TMEM97Q5BJF2 176 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 C11orf45Q8TAV5 145 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 VSIG2Q96IQ7 327 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 CHTOPQ9Y3Y2 248 aaKnown RBP8.76□□□□□ -1.01
SRSF1-204ENST00000581979 PYGO1Q9Y3Y4 419 aa8.76□□□□□ -1.01
SRSF1-204ENST00000581979 TRBV25-1A0A075B6N4 114 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms