RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 AMTP48728 403 aa9.84□□□□□ -0.83
SKA2-205ENST00000580541 IQCJQ1A5X6 159 aa9.84□□□□□ -0.83
SKA2-205ENST00000580541 Q8N8P6 123 aa9.84□□□□□ -0.83
SKA2-205ENST00000580541 TMEM243Q9BU79 118 aa9.84□□□□□ -0.83
SKA2-205ENST00000580541 TRAV9-2A0A087WT02 112 aa9.83□□□□□ -0.84
SKA2-205ENST00000580541 H7C423 109 aa9.83□□□□□ -0.84
SKA2-205ENST00000580541 K7EP13 123 aa9.83□□□□□ -0.84
SKA2-205ENST00000580541 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
SKA2-205ENST00000580541 TMEM262E9PQX1 116 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 SIVA1O15304 175 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 LY6G6CO95867 125 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 ORMDL2Q53FV1 153 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 FA2HQ7L5A8 372 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 Q9H8V8 135 aa9.82□□□□□ -0.84
SKA2-205ENST00000580541 A0A087WX48 190 aa9.81□□□□□ -0.84
SKA2-205ENST00000580541 LINC01549A6NIU2 74 aa9.81□□□□□ -0.84
SKA2-205ENST00000580541 TSHBP01222 138 aa9.81□□□□□ -0.84
SKA2-205ENST00000580541 IFI27P40305 119 aaPredicted RBP9.81□□□□□ -0.84
SKA2-205ENST00000580541 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
SKA2-205ENST00000580541 CHCHD7Q9BUK0 85 aa9.81□□□□□ -0.84
SKA2-205ENST00000580541 CSMD3Q7Z407 3707 aa9.8□□□□□ -0.84
SKA2-205ENST00000580541 LAGE3Q14657 143 aa9.8□□□□□ -0.84
SKA2-205ENST00000580541 C18orf32Q8TCD1 76 aa9.8□□□□□ -0.84
SKA2-205ENST00000580541 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
SKA2-205ENST00000580541 TENM2Q9NT68 2774 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 IGLV2-18A0A075B6J9 118 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 C1orf196B1AJZ1 125 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 LINC00614P0C842 121 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 Q0VG73 95 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 BAGE3Q86Y29 109 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 C10orf126Q8N4M7 172 aa9.79□□□□□ -0.84
SKA2-205ENST00000580541 DNAH10OSP0CZ25 163 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 ESDP10768 282 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 TTC32Q5I0X7 151 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 TMEM101Q96IK0 257 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
SKA2-205ENST00000580541 DYNC2H1Q8NCM8 4307 aaKnown RBP9.78□□□□□ -0.84
SKA2-205ENST00000580541 A0A1B0GUV1 79 aa9.77□□□□□ -0.85
SKA2-205ENST00000580541 ZNF25P17030 456 aaPredicted RBP9.77□□□□□ -0.85
SKA2-205ENST00000580541 DGAT2L7PQ6IED9 249 aa9.77□□□□□ -0.85
SKA2-205ENST00000580541 NIT1Q86X76 327 aa9.77□□□□□ -0.85
SKA2-205ENST00000580541 DEFB104AQ8WTQ1 72 aa9.77□□□□□ -0.85
SKA2-205ENST00000580541 CHCHD1Q96BP2 118 aaKnown RBP9.77□□□□□ -0.85
SKA2-205ENST00000580541 LINC01546A6NGU7 62 aa9.76□□□□□ -0.85
SKA2-205ENST00000580541 GAGE6Q13070 117 aa9.76□□□□□ -0.85
SKA2-205ENST00000580541 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
SKA2-205ENST00000580541 C20orf203Q8NBC4 194 aa9.76□□□□□ -0.85
SKA2-205ENST00000580541 J3QL48 77 aa9.75□□□□□ -0.85
SKA2-205ENST00000580541 RNASEKQ6P5S7 137 aaKnown RBP9.75□□□□□ -0.85
SKA2-205ENST00000580541 TIMM21Q9BVV7 248 aa9.75□□□□□ -0.85
SKA2-205ENST00000580541 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
SKA2-205ENST00000580541 STARD9Q9P2P6 4700 aa9.75□□□□□ -0.85
SKA2-205ENST00000580541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.74□□□□□ -0.85
SKA2-205ENST00000580541 LCE6AA0A183 80 aa9.74□□□□□ -0.85
SKA2-205ENST00000580541 IGKV2-29A2NJV5 120 aaPredicted RBP9.74□□□□□ -0.85
SKA2-205ENST00000580541 FGF6P10767 208 aa9.74□□□□□ -0.85
SKA2-205ENST00000580541 BTF3P20290 206 aaKnown RBP9.74□□□□□ -0.85
SKA2-205ENST00000580541 MRPL52Q86TS9 123 aaKnown RBP9.74□□□□□ -0.85
SKA2-205ENST00000580541 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
SKA2-205ENST00000580541 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
SKA2-205ENST00000580541 IGHV3-30P01768 117 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 IGHV3-33P01772 117 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 IGHV3-30-3P0DP02 117 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 IGHV3-30-5P0DP03 117 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 PAPPA-AS1Q5QFB9 102 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 OR5A1Q8NGJ0 315 aa9.73□□□□□ -0.85
SKA2-205ENST00000580541 NBDYA0A0U1RRE5 68 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BKO60814 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HSBP1O75506 76 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 ANGP03950 147 aaKnown RBP9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BJP06899 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 NPSP0C0P6 89 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BOP23527 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BBP33778 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BDP58876 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BCP62807 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 RBX1P62877 108 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST2H2BEQ16778 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.72□□□□□ -0.85
SKA2-205ENST00000580541 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BHQ93079 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BNQ99877 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 HIST1H2BMQ99879 126 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 PYGO1Q9Y3Y4 419 aa9.72□□□□□ -0.85
SKA2-205ENST00000580541 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
SKA2-205ENST00000580541 MPV17L2Q567V2 206 aa9.71□□□□□ -0.86
SKA2-205ENST00000580541 TOMM6Q96B49 74 aa9.71□□□□□ -0.86
SKA2-205ENST00000580541 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 HBDP02042 147 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 CRPP02741 224 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 KLK12Q9UKR0 248 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 UBE2D4Q9Y2X8 147 aa9.7□□□□□ -0.86
SKA2-205ENST00000580541 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
SKA2-205ENST00000580541 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
SKA2-205ENST00000580541 RPL39P62891 51 aaKnown RBP9.69□□□□□ -0.86
SKA2-205ENST00000580541 Q6ZN92 141 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms