RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 CIDEAO60543 219 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 IGHV3-53P01767 116 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 FXYD2P54710 66 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 COTL1Q14019 142 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 RHOHQ15669 191 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 RNASE13Q5GAN3 156 aaKnown RBP3.31□□□□□ -1.88
NUP85-213ENST00000579838 C20orf203Q8NBC4 194 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 ZNRF2Q8NHG8 242 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 TIMM17AQ99595 171 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 NAA38Q9BRA0 125 aaKnown RBP3.31□□□□□ -1.88
NUP85-213ENST00000579838 SPXQ9BT56 116 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 CHAC1Q9BUX1 264 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 CST9LQ9H4G1 147 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 COX11Q9Y6N1 276 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 TRBV7-3A0A075B6L6 115 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.3□□□□□ -1.88
NUP85-213ENST00000579838 TRGV1A0A0A0MS02 117 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 TRAV8-6A0A0B4J262 113 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 LOC100131303A0A0U1RQF7 123 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 IGKV2-29A2NJV5 120 aaPredicted RBP3.3□□□□□ -1.88
NUP85-213ENST00000579838 SIVA1O15304 175 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 PPP1R17O96001 155 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 PLNP26678 52 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 HSD52Q0P140 79 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 PMVKQ15126 192 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 ORAOV1Q8WV07 137 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 TMEM141Q96I45 108 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 AMELXQ99217 191 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 PRADC1Q9BSG0 188 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 HIGD1BQ9P298 99 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 CBY1Q9Y3M2 126 aa3.3□□□□□ -1.88
NUP85-213ENST00000579838 A0A0J9YXV3 536 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 GAGE12BA1L429 117 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 E9PLD3 99 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 K7ERJ3 54 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 CCL25O15444 150 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 CRLF1O75462 422 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 GAGE7O76087 117 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 PF4P02776 101 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 GAGE12FP0CL80 117 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 GAGE12GP0CL81 117 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 GAGE12IP0CL82 117 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 ZNF22P17026 224 aaPredicted RBP3.29□□□□□ -1.88
NUP85-213ENST00000579838 SCGB2A2Q13296 93 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 PIK3CD-AS1Q5SR53 167 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 C12orf54Q6X4T0 127 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 NTM-AS1Q6ZSK4 140 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 Q6ZUT4 128 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 NFE4Q86UQ8 179 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 SBSPONQ8IVN8 264 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
NUP85-213ENST00000579838 KIR2DL4Q99706 377 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 FAM110AQ9BQ89 295 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
NUP85-213ENST00000579838 UBE2D4Q9Y2X8 147 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 X6R8D5 127 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 OTOGQ6ZRI0 2925 aa3.29□□□□□ -1.88
NUP85-213ENST00000579838 IGHV3-64A0A075B6Q5 118 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 TRAV4A0A0B4J268 109 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 MYMXA0A1B0GTQ4 84 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 TMEM223A0PJW6 202 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GAGE12JA6NER3 117 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 K7EQD1 137 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 RHODO00212 210 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GCSHP23434 173 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 PCP4P48539 62 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GAGE1Q13065 139 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GAGE4Q13068 117 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GAGE5Q13069 117 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 GAGE13Q4V321 117 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 AMMECR1LQ6DCA0 310 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 CEND1Q8N111 149 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 OR4C5Q8NGB2 326 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 RAB37Q96AX2 223 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 C16orf74Q96GX8 76 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 DNAJC30Q96LL9 226 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 CITED1Q99966 193 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 OVOL2Q9BRP0 275 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 TNFRSF18Q9Y5U5 241 aa3.28□□□□□ -1.88
NUP85-213ENST00000579838 C9orf118A6NHY6 69 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 ZNF815PA8K554 130 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 A8MZ25 164 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 H3BRM9 83 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 EIF4EBP3O60516 100 aaPredicted RBP3.27□□□□□ -1.89
NUP85-213ENST00000579838 CMC4P56277 68 aaPredicted RBP3.27□□□□□ -1.89
NUP85-213ENST00000579838 UBE2D3P61077 147 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 UBE2D2P62837 147 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 SEC11AP67812 179 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 DAZ2Q13117 558 aaKnown RBP3.27□□□□□ -1.89
NUP85-213ENST00000579838 FHL2Q14192 279 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 OR5A1Q8NGJ0 315 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 OR11H2Q8NH07 326 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 PYGO1Q9Y3Y4 419 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 ITPR2Q14571 2701 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 CREBBPQ92793 2442 aa3.27□□□□□ -1.89
NUP85-213ENST00000579838 NOTCH2Q04721 2471 aa3.26□□□□□ -1.89
NUP85-213ENST00000579838 TRAV8-3A0A0A6YYJ7 113 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms