RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 Q9UF83 564 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 CSMD1Q96PZ7 3565 aa6.73□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGHV3-64A0A075B6Q5 118 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 IGHV3-38A0A0C4DH36 116 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TRBV10-1A0A0K0K1A3 114 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 K7EQD1 137 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TSPAN13O95857 204 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 CEMP1Q6PRD7 247 aaPredicted RBP6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 Q6ZUT4 128 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 DOPEY2Q9Y3R5 2298 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
CDK5RAP3-208ENST00000578525 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 F8W1H4 67 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 APOMO95445 188 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 IGHV3-30-3P0DP02 117 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 RNASE13Q5GAN3 156 aaKnown RBP6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LYRM7Q5U5X0 104 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 NDUFA11Q86Y39 141 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 C16orf74Q96GX8 76 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 VPS25Q9BRG1 176 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 C19orf73Q9NVV2 129 aa6.71□□□□□ -1.34
CDK5RAP3-208ENST00000578525 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 G3V4G9 280 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TIRAPP58753 221 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 Q6ZTI0 123 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 C10orf126Q8N4M7 172 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 C1QTNF4Q9BXJ3 329 aa6.7□□□□□ -1.34
CDK5RAP3-208ENST00000578525 FLNCQ14315 2725 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CIDEAO60543 219 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CFC1BP0CG36 223 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CFC1P0CG37 223 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 RPL35AP18077 110 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 SMAGPQ0VAQ4 97 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE13Q4V321 117 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 DGAT2L7PQ6IED9 249 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 DAZ4Q86SG3 579 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GEMIN7Q9H840 131 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 ASH1LQ9NR48 2969 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 DAZ3Q9NR90 486 aaKnown RBP6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PRO0461Q9UI25 63 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 FAM208BQ5VWN6 2430 aa6.69□□□□□ -1.34
CDK5RAP3-208ENST00000578525 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TRAV8-3A0A0A6YYJ7 113 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 A0A0B4J2C4 111 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PLAC8L1A1L4L8 177 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 H3BMG7 143 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 SPINK8P0C7L1 97 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 UBE2D3P61077 147 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 UBE2D2P62837 147 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 FAM19A3Q7Z5A8 133 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 MUSTN1Q8IVN3 82 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 SBSPONQ8IVN8 264 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 VSIG2Q96IQ7 327 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 WFDC10AQ9H1F0 79 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PRO1854Q9UHT4 67 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 NDUFA12Q9UI09 145 aa6.68□□□□□ -1.34
CDK5RAP3-208ENST00000578525 A4D1N5 150 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE12JA6NER3 117 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE4Q13068 117 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE5Q13069 117 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 WFDC2Q14508 124 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LITAFQ99732 161 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 SPANXCQ9NY87 97 aa6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 CSDC2Q9Y534 153 aaKnown RBP6.67□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LOC107984156A0A0G2JMH3 177 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TEX48A0A1B0GUV7 120 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TIMM17BO60830 172 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE7O76087 117 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE12FP0CL80 117 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE12GP0CL81 117 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 GAGE12IP0CL82 117 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PSMB2P49721 201 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 KRTAP10-3P60369 221 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 HERVK_113P63121 156 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 ZFAND6Q6FIF0 208 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 NTM-AS1Q6ZSK4 140 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 ARL17AQ8IVW1 177 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 MYO18BQ8IUG5 2567 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 COL12A1Q99715 3063 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 NAV2Q8IVL1 2488 aa6.66□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TRBV20-1A0A075B6N2 111 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TRGV2A0A075B6R0 118 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 TRBV6-4A0A1B0GX49 114 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 EIF4EBP3O60516 100 aaPredicted RBP6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 LY6G6DO95868 133 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 IGHV3-33P01772 117 aa6.65□□□□□ -1.34
CDK5RAP3-208ENST00000578525 PF4P02776 101 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms