RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
NDEL1-204ENST00000578172 HIGD1BQ9P298 99 aa10.17□□□□□ -0.78
NDEL1-204ENST00000578172 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
NDEL1-204ENST00000578172 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
NDEL1-204ENST00000578172 PPP1R17O96001 155 aa10.16□□□□□ -0.78
NDEL1-204ENST00000578172 OR13C6PQ8NH95 151 aa10.16□□□□□ -0.78
NDEL1-204ENST00000578172 GCN1Q92616 2671 aaKnown RBP10.16□□□□□ -0.78
NDEL1-204ENST00000578172 XGP55808 180 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 TAL2Q16559 108 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 CITED1Q99966 193 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 NIPBLQ6KC79 2804 aaeCLIP10.15□□□□□ -0.78
NDEL1-204ENST00000578172 TRGV1A0A0A0MS02 117 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 TCL1BO95988 128 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 ATXN8Q156A1 80 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 TMEM61Q8N0U2 210 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 ZNRF2Q8NHG8 242 aa10.15□□□□□ -0.78
NDEL1-204ENST00000578172 RPL35AP18077 110 aaKnown RBP10.14□□□□□ -0.79
NDEL1-204ENST00000578172 HERV-K104P63124 156 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 CIRBPQ14011 172 aaKnown RBP10.14□□□□□ -0.79
NDEL1-204ENST00000578172 DCANP1Q8TF63 244 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 LINC01356Q8N9X3 169 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 H3BMM0 161 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 UBE2WQ96B02 151 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 EDA2RQ9HAV5 297 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 A0A0J9YX75 114 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 Q96MF0 132 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 PSMG3-AS1Q96PY0 264 aa10.14□□□□□ -0.79
NDEL1-204ENST00000578172 SOCS3O14543 225 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 Q6ZSV7 163 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 TM2D2Q9BX73 214 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 DNAL4O96015 105 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 ZMAT4Q9H898 229 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 LENEPQ9Y5L5 61 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 TSHBP01222 138 aa10.13□□□□□ -0.79
NDEL1-204ENST00000578172 C11orf68Q9H3H3 251 aaKnown RBP10.13□□□□□ -0.79
NDEL1-204ENST00000578172 SRSF2Q01130 221 aaKnown RBP10.12□□□□□ -0.79
NDEL1-204ENST00000578172 CRYGDP07320 174 aa10.12□□□□□ -0.79
NDEL1-204ENST00000578172 CFC1BP0CG36 223 aa10.12□□□□□ -0.79
NDEL1-204ENST00000578172 CFC1P0CG37 223 aa10.12□□□□□ -0.79
NDEL1-204ENST00000578172 GATA3P23771 443 aa10.11□□□□□ -0.79
NDEL1-204ENST00000578172 MRPL23Q16540 153 aaKnown RBP10.11□□□□□ -0.79
NDEL1-204ENST00000578172 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
NDEL1-204ENST00000578172 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
NDEL1-204ENST00000578172 TIMM21Q9BVV7 248 aa10.11□□□□□ -0.79
NDEL1-204ENST00000578172 TRBV7-3A0A075B6L6 115 aa10.11□□□□□ -0.79
NDEL1-204ENST00000578172 PRORYQ9H606 182 aa10.1□□□□□ -0.79
NDEL1-204ENST00000578172 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
NDEL1-204ENST00000578172 TEX49A0A1B0GTD5 131 aa10.1□□□□□ -0.79
NDEL1-204ENST00000578172 CARD19Q96LW7 228 aa10.1□□□□□ -0.79
NDEL1-204ENST00000578172 I3L3M4 83 aa10.1□□□□□ -0.79
NDEL1-204ENST00000578172 TRAV12-1A0A0B4J245 112 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 A0A0J9YY99 117 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 NDUFA7O95182 113 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 PSMB8P28062 276 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 CRIP2P52943 208 aaPredicted RBP10.09□□□□□ -0.79
NDEL1-204ENST00000578172 C19orf54Q5BKX5 351 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 GAGE2AQ6NT46 116 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 M0QY20 66 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 MORN3Q6PF18 240 aaPredicted RBP10.09□□□□□ -0.79
NDEL1-204ENST00000578172 WFDC10AQ9H1F0 79 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 VPREB3Q9UKI3 123 aa10.09□□□□□ -0.79
NDEL1-204ENST00000578172 FLNBO75369 2602 aaKnown RBP10.08□□□□□ -0.8
NDEL1-204ENST00000578172 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 STHQ8IWL8 128 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 IGLV4-69A0A075B6H9 119 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 TRBV7-9A0A0J9YWB2 115 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 KLLNB2CW77 178 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 NDUFA11Q86Y39 141 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 HELZ2Q9BYK8 2649 aaKnown RBP10.08□□□□□ -0.8
NDEL1-204ENST00000578172 TRGV11A0A075B6L2 103 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 K7EQG2 157 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 IGLV1-40P01703 118 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
NDEL1-204ENST00000578172 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 POLR2KP53803 58 aaKnown RBP10.08□□□□□ -0.8
NDEL1-204ENST00000578172 RBMY1FQ15415 496 aaKnown RBP10.08□□□□□ -0.8
NDEL1-204ENST00000578172 CLEC2BQ92478 149 aa10.08□□□□□ -0.8
NDEL1-204ENST00000578172 TRGV2A0A075B6R0 118 aa10.07□□□□□ -0.8
NDEL1-204ENST00000578172 IGHV4-4A0A075B6R2 117 aa10.07□□□□□ -0.8
NDEL1-204ENST00000578172 LINC00315P59091 139 aa10.07□□□□□ -0.8
NDEL1-204ENST00000578172 NDUFA12Q9UI09 145 aa10.07□□□□□ -0.8
NDEL1-204ENST00000578172 A0A096LPF7 62 aa10.06□□□□□ -0.8
NDEL1-204ENST00000578172 Q6ZSN1 163 aa10.06□□□□□ -0.8
NDEL1-204ENST00000578172 TRAV4A0A0B4J268 109 aa10.06□□□□□ -0.8
NDEL1-204ENST00000578172 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
NDEL1-204ENST00000578172 HIST1H4AP62805 103 aaKnown RBP10.06□□□□□ -0.8
NDEL1-204ENST00000578172 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 NFE4Q86UQ8 179 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 C20orf203Q8NBC4 194 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 SPATA25Q9BR10 227 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 PLA2G2AP14555 144 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 CCDC179H3BU77 68 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 CHCHD5Q9BSY4 110 aa10.05□□□□□ -0.8
NDEL1-204ENST00000578172 TMEM141Q96I45 108 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 KIF25-AS1Q9Y6Z4 181 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 CFAP126Q5VTH2 177 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
NDEL1-204ENST00000578172 IGLV4-3A0A075B6K6 122 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms