RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 IGLV1-51P01701 117 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 EGR2P11161 476 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 RBM3P98179 157 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 TNRC6AQ8NDV7 1962 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 MAST4O15021 2626 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 A0A087X0K7 114 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 HSD52Q0P140 79 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 SAMD5Q5TGI4 173 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 CEMP1Q6PRD7 247 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 FAM231DQ6ZW35 169 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 FAM19A5Q7Z5A7 132 aaPredicted RBP2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 MLST8Q9BVC4 326 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 H0Y9J4 135 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 J3QQQ9 107 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 RS1O15537 224 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLV2-8P01709 118 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 CRYBA4P53673 196 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 PROK1P58294 105 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 MRGPRG-AS1Q2M3A8 158 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 CDH23Q9H251 3354 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 PLXNA2O75051 1894 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 H7C423 109 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 TCL1BO95988 128 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 HIST2H2BDQ6DRA6 164 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 GAGE2AQ6NT46 116 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 WFDC10AQ9H1F0 79 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 SND1-IT1Q9HBX3 110 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 MDFICQ9P1T7 246 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLV4-69A0A075B6H9 119 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 F8VRH5 84 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 LY6LH3BQJ8 138 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 SMIM6P0DI80 62 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 DEFB1P60022 68 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 POM121L12Q8N7R1 296 aa2.19□□□□□ -2.06
SMCHD1-203ENST00000577880 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 FAM236DA0A1B0GTK5 79 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 H0YGX0 51 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 PLA2G1BP04054 148 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 FAM236CP0DP71 79 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 FHL3Q13643 280 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ATRAIDQ6UW56 229 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CLUHP3Q96NS8 147 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CHCHD7Q9BUK0 85 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 LINC00574Q9H8X3 128 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 SS18L2Q9UHA2 77 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ANKRD17O75179 2603 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 MYO15AQ9UKN7 3530 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 PRAC2D3DTV9 90 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 H3BUT2 72 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 NPYP01303 97 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 IFITM1P13164 125 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 COX7BP24311 80 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 Q6ZTC4 211 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 C18orf65Q6ZTR6 163 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 PCP2Q8IVA1 136 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 MDFIQ99750 246 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ORMDL1Q9P0S3 153 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 HECTD1Q9ULT8 2610 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 RANBP2P49792 3224 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 PRSS47A8MTI9 375 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 NCR3O14931 201 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLV1-40P01703 118 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CXCL1P09341 107 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 SEC61GP60059 68 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 REG3GQ6UW15 175 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CASC2Q6XLA1 102 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 Q6ZSR3 168 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 SPATA12Q7Z6I5 190 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ANKRD29Q8N6D5 301 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ZFAND2AQ8N6M9 145 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 ATG2AQ2TAZ0 1938 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CEP192Q8TEP8 1941 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 TRBV6-8A0A0A6YYG3 113 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLV2-11P01706 119 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 NREPQ16612 68 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 BAALCQ8WXS3 180 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CITED1Q99966 193 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 MUC4Q99102 2169 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 CHD9Q3L8U1 2897 aa2.18□□□□□ -2.06
SMCHD1-203ENST00000577880 A0A0J9YXV3 536 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 PLAC8L1A1L4L8 177 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 ZNF124Q15973 351 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 CARHSP1Q9Y2V2 147 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 TRBV24-1A0A075B6N3 115 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 SYS1-DBNDD2H3BUS1 97 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 C6orf223Q8N319 242 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 PLA2G2EQ9NZK7 142 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 DNAH14Q0VDD8 3507 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 PCDH15Q96QU1 1955 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 MP68P56378 58 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 CTAG1AP78358 180 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 MORN5Q5VZ52 161 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 RPL39LQ96EH5 51 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 A0A1W2PPR1 153 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 RBX1P62877 108 aa2.17□□□□□ -2.06
SMCHD1-203ENST00000577880 MTURNQ8N3F0 131 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms