RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PGLYRP4Q96LB8 373 aa9.86□□□□□ -0.83
CTDNEP1-211ENST00000575783 CTXND1A0A1B0GTU2 59 aa9.85□□□□□ -0.83
CTDNEP1-211ENST00000575783 AKR1C3P42330 323 aa9.85□□□□□ -0.83
CTDNEP1-211ENST00000575783 CST9LP1Q5W188 147 aa9.85□□□□□ -0.83
CTDNEP1-211ENST00000575783 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
CTDNEP1-211ENST00000575783 RASL11AQ6T310 242 aa9.85□□□□□ -0.83
CTDNEP1-211ENST00000575783 XCL1P47992 114 aa9.84□□□□□ -0.83
CTDNEP1-211ENST00000575783 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
CTDNEP1-211ENST00000575783 STOML3Q8TAV4 291 aa9.84□□□□□ -0.83
CTDNEP1-211ENST00000575783 TPPP3Q9BW30 176 aa9.84□□□□□ -0.83
CTDNEP1-211ENST00000575783 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
CTDNEP1-211ENST00000575783 NIT2Q9NQR4 276 aa9.83□□□□□ -0.84
CTDNEP1-211ENST00000575783 IGHV1-58A0A0C4DH39 117 aa9.82□□□□□ -0.84
CTDNEP1-211ENST00000575783 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
CTDNEP1-211ENST00000575783 PHF5AQ7RTV0 110 aaKnown RBP9.82□□□□□ -0.84
CTDNEP1-211ENST00000575783 IGLV1-50A0A075B6I6 118 aa9.81□□□□□ -0.84
CTDNEP1-211ENST00000575783 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
CTDNEP1-211ENST00000575783 IGLV7-43P04211 117 aa9.81□□□□□ -0.84
CTDNEP1-211ENST00000575783 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
CTDNEP1-211ENST00000575783 H0Y9J4 135 aa9.8□□□□□ -0.84
CTDNEP1-211ENST00000575783 BAGE2Q86Y30 109 aa9.8□□□□□ -0.84
CTDNEP1-211ENST00000575783 TCEAL7Q9BRU2 100 aa9.8□□□□□ -0.84
CTDNEP1-211ENST00000575783 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 CCL25O15444 150 aa9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 BCL2P10415 239 aa9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 FHITP49789 147 aa9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 UBE2D1P51668 147 aa9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 MLST8Q9BVC4 326 aa9.79□□□□□ -0.84
CTDNEP1-211ENST00000575783 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
CTDNEP1-211ENST00000575783 MAP1LC3B2A6NCE7 125 aa9.78□□□□□ -0.84
CTDNEP1-211ENST00000575783 RPL7L1Q6DKI1 246 aaKnown RBP9.78□□□□□ -0.84
CTDNEP1-211ENST00000575783 MAP1LC3BQ9GZQ8 125 aa9.78□□□□□ -0.84
CTDNEP1-211ENST00000575783 A0A087WZ39 114 aa9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 FGF6P10767 208 aa9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 CAMPP49913 170 aa9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 AKR1C8PQ5T2L2 129 aa9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 MARVELD1Q9BSK0 173 aa9.77□□□□□ -0.85
CTDNEP1-211ENST00000575783 LINC00959A0A1B0GUT2 108 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 PAGE4O60829 102 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 TSPAN13O95857 204 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 NTF3P20783 257 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 Q6ZNX1 250 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 OR5A1Q8NGJ0 315 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 ISOC2Q96AB3 205 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 MED28Q9H204 178 aa9.76□□□□□ -0.85
CTDNEP1-211ENST00000575783 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
CTDNEP1-211ENST00000575783 KRTAP1-4P0C5Y4 121 aa9.75□□□□□ -0.85
CTDNEP1-211ENST00000575783 RPL18AQ02543 176 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-211ENST00000575783 BORCS7-ASMTA0A0B4J1R7 106 aa9.74□□□□□ -0.85
CTDNEP1-211ENST00000575783 SCO2A0A1W2PP80 73 aa9.74□□□□□ -0.85
CTDNEP1-211ENST00000575783 APOMO95445 188 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 IGLC6P0CF74 106 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 RPL13AP40429 203 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 DEFA1P59665 94 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 NUP35Q8NFH5 326 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 OR2D3Q8NGH3 330 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 TMEM101Q96IK0 257 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 BTF3L4Q96K17 158 aa9.73□□□□□ -0.85
CTDNEP1-211ENST00000575783 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 H7C423 109 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 UPK1BO75841 260 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 APCSP02743 223 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 TRGC1P0CF51 173 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 IFITM3Q01628 133 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 SS18Q15532 418 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 CAMK2N2Q96S95 79 aa9.72□□□□□ -0.85
CTDNEP1-211ENST00000575783 MALP21145 153 aa9.71□□□□□ -0.86
CTDNEP1-211ENST00000575783 CD164L2Q6UWJ8 174 aa9.71□□□□□ -0.86
CTDNEP1-211ENST00000575783 TMUB2Q71RG4 321 aa9.71□□□□□ -0.86
CTDNEP1-211ENST00000575783 OPRPNQ99935 248 aaPredicted RBP9.71□□□□□ -0.86
CTDNEP1-211ENST00000575783 NCR2O95944 276 aa9.7□□□□□ -0.86
CTDNEP1-211ENST00000575783 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
CTDNEP1-211ENST00000575783 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
CTDNEP1-211ENST00000575783 A0A1B0GV50 99 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 F2Z2F3 143 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 RPS20P60866 119 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 Q5BKY6 102 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 LYZL1Q6UWQ5 148 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 S100ZQ8WXG8 99 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 RPL39LQ96EH5 51 aaKnown RBP9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 CRCT1Q9UGL9 99 aa9.69□□□□□ -0.86
CTDNEP1-211ENST00000575783 MUC17Q685J3 4493 aa9.68□□□□□ -0.86
CTDNEP1-211ENST00000575783 PFDN1O60925 122 aa9.68□□□□□ -0.86
CTDNEP1-211ENST00000575783 EIF5AL1Q6IS14 154 aaKnown RBP9.68□□□□□ -0.86
CTDNEP1-211ENST00000575783 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
CTDNEP1-211ENST00000575783 BCL2L11O43521 198 aa9.67□□□□□ -0.86
CTDNEP1-211ENST00000575783 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
CTDNEP1-211ENST00000575783 TSKUQ8WUA8 353 aa9.67□□□□□ -0.86
CTDNEP1-211ENST00000575783 COX7A2LO14548 114 aa9.66□□□□□ -0.86
CTDNEP1-211ENST00000575783 TWIST1Q15672 202 aa9.66□□□□□ -0.86
CTDNEP1-211ENST00000575783 SFT2D1Q8WV19 159 aa9.66□□□□□ -0.86
CTDNEP1-211ENST00000575783 IFNA1P01562 189 aa9.65□□□□□ -0.86
CTDNEP1-211ENST00000575783 PMCHP20382 165 aa9.65□□□□□ -0.86
CTDNEP1-211ENST00000575783 CARHSP1Q9Y2V2 147 aaKnown RBP9.65□□□□□ -0.86
CTDNEP1-211ENST00000575783 FXYD6-FXYD2A0A087WZ82 144 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms