RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 I3L3M4 83 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 ACYP1P07311 99 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 NRGNQ92686 78 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 IGHV7-81A0A0B4J1V7 117 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 TMEM223A0PJW6 202 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 M0R1W7 72 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 ZNF575Q86XF7 245 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 NPBQ8NG41 125 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 NACAE9PAV3 2078 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 RHOHQ15669 191 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 LINC00643Q86TS7 51 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 MRPL53Q96EL3 112 aaKnown RBP7.17□□□□□ -1.26
CCDC40-212ENST00000574799 LINC01587Q99440 93 aa7.17□□□□□ -1.26
CCDC40-212ENST00000574799 FAM110DQ8TAY7 271 aaPredicted RBP7.17□□□□□ -1.26
CCDC40-212ENST00000574799 LENEPQ9Y5L5 61 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 ZFAND3Q9H8U3 227 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 A8MZ25 164 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 BAALC-AS2P0C853 105 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 PF4V1P10720 104 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 ZFAND2AQ8N6M9 145 aa7.16□□□□□ -1.26
CCDC40-212ENST00000574799 GPHB5Q86YW7 130 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 C20orf173Q96LM9 149 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 IGKV3D-7A0A0C4DH55 119 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 FAM240AA0A1B0GVK7 77 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 A0A1B0GX51 115 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 LST1O00453 97 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 TMEM219Q86XT9 240 aa7.15□□□□□ -1.26
CCDC40-212ENST00000574799 ANK3Q12955 4377 aaKnown RBP7.15□□□□□ -1.27
CCDC40-212ENST00000574799 GNLYP22749 145 aa7.15□□□□□ -1.27
CCDC40-212ENST00000574799 HIST1H4AP62805 103 aaKnown RBP7.15□□□□□ -1.27
CCDC40-212ENST00000574799 PRRC2AP48634 2157 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 IGHV3OR16-10A0A075B7F0 116 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 TRBV7-1A0A0A6YYK4 115 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 POLR2KP53803 58 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 PEMTQ9UBM1 199 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 TRAV12-2A0A075B6T6 113 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 RNASE3P12724 160 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 APCP25054 2843 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 DAZ2Q13117 558 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 DAZ4Q86SG3 579 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 CCDC140Q96MF4 163 aa7.14□□□□□ -1.27
CCDC40-212ENST00000574799 DAZ1Q9NQZ3 744 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 DAZ3Q9NR90 486 aaKnown RBP7.14□□□□□ -1.27
CCDC40-212ENST00000574799 TRBV7-7A0A0K0K1E9 115 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 ATOX1O00244 68 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 HOXD3P31249 432 aaPredicted RBP7.13□□□□□ -1.27
CCDC40-212ENST00000574799 Q8N6K4 173 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 KLK9Q9UKQ9 250 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 INAFM2P0DMQ5 153 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 MIAQ16674 131 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 C20orf203Q8NBC4 194 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 CLPSL1A2RUU4 121 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 COX7CP15954 63 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 LINC00526Q96FQ7 95 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 SIRPDQ9H106 197 aa7.13□□□□□ -1.27
CCDC40-212ENST00000574799 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 SDIM1Q6ZPB5 146 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 LRRC75A-AS1Q8N1F1 130 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 SPANXDQ9BXN6 97 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 EIF4EBP3O60516 100 aaPredicted RBP7.12□□□□□ -1.27
CCDC40-212ENST00000574799 IGHV1-69P01742 117 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 Q8N9W7 124 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 RHPN1-AS1Q9BWJ2 59 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 PDZD2O15018 2839 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 TMEM61Q8N0U2 210 aa7.12□□□□□ -1.27
CCDC40-212ENST00000574799 FLNBO75369 2602 aaKnown RBP7.11□□□□□ -1.27
CCDC40-212ENST00000574799 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 IGHV1-58A0A0C4DH39 117 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 LMO4P61968 165 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 NSUN5P1Q3KNT7 163 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 DOPEY1Q5JWR5 2465 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 IGHV4OR15-8A0A075B7B6 117 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 A0A087WW49 117 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 NXPH4O95158 308 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 UNQ9165/PRO28630Q6UXU0 137 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 AMELXQ99217 191 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 ATP5G1P05496 136 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 MED14OSP0DP75 135 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 LY6EQ16553 131 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 MINOS1Q5TGZ0 78 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 PRIMA1Q86XR5 153 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 COPS9Q8WXC6 57 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 Q9HAA7 133 aa7.11□□□□□ -1.27
CCDC40-212ENST00000574799 SONP18583 2426 aaKnown RBP7.1□□□□□ -1.27
CCDC40-212ENST00000574799 DSCR8Q96T75 97 aa7.1□□□□□ -1.27
CCDC40-212ENST00000574799 Q9H8V8 135 aa7.1□□□□□ -1.27
CCDC40-212ENST00000574799 SYNJ2BPP57105 145 aa7.1□□□□□ -1.27
CCDC40-212ENST00000574799 IGHV3-38A0A0C4DH36 116 aa7.1□□□□□ -1.27
CCDC40-212ENST00000574799 SPINK13Q1W4C9 94 aa7.1□□□□□ -1.27
CCDC40-212ENST00000574799 BBC3Q96PG8 261 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-212ENST00000574799 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.09□□□□□ -1.27
CCDC40-212ENST00000574799 IGKV2-29A2NJV5 120 aaPredicted RBP7.09□□□□□ -1.27
CCDC40-212ENST00000574799 MINOS1-NBL1R4GNA1 71 aa7.09□□□□□ -1.27
CCDC40-212ENST00000574799 TLN2Q9Y4G6 2542 aa7.09□□□□□ -1.27
CCDC40-212ENST00000574799 RNF223E7ERA6 249 aa7.09□□□□□ -1.27
CCDC40-212ENST00000574799 RNASE1P07998 156 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms