RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	REG3A	Q06141	175 aa		10.86	□□□□□ -0.67
RPS15A-209	ENST00000573554	CIRBP-AS1	Q8TBR5	109 aa		10.86	□□□□□ -0.67
RPS15A-209	ENST00000573554	TMEM243	Q9BU79	118 aa		10.86	□□□□□ -0.67
RPS15A-209	ENST00000573554	GFRA4	Q9GZZ7	299 aa		10.86	□□□□□ -0.67
RPS15A-209	ENST00000573554	TRAV26-2	A0A0B4J265	109 aa		10.85	□□□□□ -0.67
RPS15A-209	ENST00000573554		A0A1B0GUV1	79 aa		10.85	□□□□□ -0.67
RPS15A-209	ENST00000573554	PLA2G1B	P04054	148 aa	Known RBP	10.85	□□□□□ -0.67
RPS15A-209	ENST00000573554	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.85	□□□□□ -0.67
RPS15A-209	ENST00000573554	IGLV10-54	A0A075B6I4	117 aa		10.84	□□□□□ -0.67
RPS15A-209	ENST00000573554	GATC	O43716	136 aa	Known RBP	10.83	□□□□□ -0.68
RPS15A-209	ENST00000573554	FAM231D	Q6ZW35	169 aa		10.83	□□□□□ -0.68
RPS15A-209	ENST00000573554	AMT	P48728	403 aa		10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	CEBPG	P53567	150 aa		10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	KRTAP10-4	P60372	401 aa	Predicted RBP	10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	COTL1	Q14019	142 aa		10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	DGAT2L7P	Q6IED9	249 aa		10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	RPL39L	Q96EH5	51 aa	Known RBP	10.82	□□□□□ -0.68
RPS15A-209	ENST00000573554	C9orf163	Q8N9P6	203 aa		10.81	□□□□□ -0.68
RPS15A-209	ENST00000573554	TRAV8-4	A0A0B4J246	113 aa		10.8	□□□□□ -0.68
RPS15A-209	ENST00000573554		A8MWL6	223 aa		10.8	□□□□□ -0.68
RPS15A-209	ENST00000573554		A0A1B0GVG6	124 aa		10.79	□□□□□ -0.68
RPS15A-209	ENST00000573554	UBE2L6	O14933	153 aa		10.79	□□□□□ -0.68
RPS15A-209	ENST00000573554	EIF5A2	Q9GZV4	153 aa	Known RBP	10.79	□□□□□ -0.68
RPS15A-209	ENST00000573554	GAS8-AS1	O95177	125 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	CT83	Q5H943	113 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	SDIM1	Q6ZPB5	146 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	SMIM15	Q7Z3B0	74 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	LINC01551	Q86U37	167 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	CLRN3	Q8NCR9	226 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	FAM210A	Q96ND0	272 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	SMIM7	Q9BQ49	75 aa		10.78	□□□□□ -0.68
RPS15A-209	ENST00000573554	PANO1	I0J062	215 aa		10.77	□□□□□ -0.69
RPS15A-209	ENST00000573554	NDUFS6	O75380	124 aa	Known RBP	10.77	□□□□□ -0.69
RPS15A-209	ENST00000573554	SLPI	P03973	132 aa		10.77	□□□□□ -0.69
RPS15A-209	ENST00000573554	SRP19	P09132	144 aa	Known RBP	10.77	□□□□□ -0.69
RPS15A-209	ENST00000573554	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.77	□□□□□ -0.69
RPS15A-209	ENST00000573554	SDHAF1	A6NFY7	115 aa		10.76	□□□□□ -0.69
RPS15A-209	ENST00000573554	ZNF727	A8MUV8	499 aa		10.76	□□□□□ -0.69
RPS15A-209	ENST00000573554	TEX261	Q6UWH6	196 aa		10.76	□□□□□ -0.69
RPS15A-209	ENST00000573554	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	hDV102S1	A0JD36	115 aa		10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	FAM231B	A6NCW3	169 aa		10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	HIGD1C	A8MV81	97 aa		10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	NCR2	O95944	276 aa		10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	CNBP	P62633	177 aa	Known RBP	10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	TSKU	Q8WUA8	353 aa		10.75	□□□□□ -0.69
RPS15A-209	ENST00000573554	TRBV6-5	A0A0K0K1A5	114 aa		10.74	□□□□□ -0.69
RPS15A-209	ENST00000573554	RNF185	Q96GF1	192 aa		10.74	□□□□□ -0.69
RPS15A-209	ENST00000573554	OSTC	Q9NRP0	149 aa		10.74	□□□□□ -0.69
RPS15A-209	ENST00000573554	IGKV3OR2-268	A0A0C4DH90	116 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554		A0A1B0GUT8	65 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554	GAGE12H	A6NDE8	117 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554		H7C423	109 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554		J3QL48	77 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554	APCS	P02743	223 aa		10.73	□□□□□ -0.69
RPS15A-209	ENST00000573554		I3L3M4	83 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	FGF6	P10767	208 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	RAB4A	P20338	218 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	PMCH	P20382	165 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	RPS10	P46783	165 aa	Known RBP	10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	AMMECR1L	Q6DCA0	310 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	RNASEK	Q6P5S7	137 aa	Known RBP	10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	C15orf56	Q8N910	161 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	BORCS7	Q96B45	105 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554	TMEM191A	Q9H0A3	160 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554		V9GYV3	84 aa		10.72	□□□□□ -0.69
RPS15A-209	ENST00000573554		C9JQL5	133 aa		10.71	□□□□□ -0.69
RPS15A-209	ENST00000573554	TSHB	P01222	138 aa		10.71	□□□□□ -0.69
RPS15A-209	ENST00000573554	ESD	P10768	282 aa		10.71	□□□□□ -0.69
RPS15A-209	ENST00000573554	POLR2K	P53803	58 aa	Known RBP	10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	CIRBP	Q14011	172 aa	Known RBP	10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	AMN1	Q8IY45	258 aa		10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	ISOC2	Q96AB3	205 aa		10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	ST20	Q9HBF5	79 aa		10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	AP5S1	Q9NUS5	200 aa		10.7	□□□□□ -0.7
RPS15A-209	ENST00000573554	TMEM241	Q24JQ0	296 aa		10.69	□□□□□ -0.7
RPS15A-209	ENST00000573554	NUP35	Q8NFH5	326 aa		10.69	□□□□□ -0.7
RPS15A-209	ENST00000573554	TMEM242	Q9NWH2	141 aa		10.69	□□□□□ -0.7
RPS15A-209	ENST00000573554	IGHV3-64	A0A075B6Q5	118 aa		10.68	□□□□□ -0.7
RPS15A-209	ENST00000573554	RPL37A	P61513	92 aa	Known RBP	10.68	□□□□□ -0.7
RPS15A-209	ENST00000573554	RPL23	P62829	140 aa	Known RBP	10.68	□□□□□ -0.7
RPS15A-209	ENST00000573554	SRSF3	P84103	164 aa	Known RBP	10.68	□□□□□ -0.7
RPS15A-209	ENST00000573554	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	TRBV27	A0A0K0K1C4	114 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	CHTF8	P0CG12	524 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	ZNF25	P17030	456 aa	Predicted RBP	10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	HNRNPA3	P51991	378 aa	Known RBP	10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	FOXI1	Q12951	378 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	HIGD2B	Q4VC39	106 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	FAM74A3	Q4VXF1	159 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	CFAP161	Q6P656	301 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	OR5A1	Q8NGJ0	315 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	MRAP2	Q96G30	205 aa		10.67	□□□□□ -0.7
RPS15A-209	ENST00000573554	SMKR1	H3BMG3	65 aa		10.66	□□□□□ -0.7
RPS15A-209	ENST00000573554	RIG	Q13278	110 aa		10.66	□□□□□ -0.7
RPS15A-209	ENST00000573554	LRP1	Q07954	4544 aa	Known RBP	10.65	□□□□□ -0.7
RPS15A-209	ENST00000573554	LINC00959	A0A1B0GUT2	108 aa		10.65	□□□□□ -0.7

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