RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 SPTSSBQ8NFR3 76 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 SEC11CQ9BY50 192 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 NAA60Q9H7X0 242 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 AP4S1Q9Y587 144 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 MEGF8Q7Z7M0 2845 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 TET3O43151 1660 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 ZNF609O15014 1411 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 PATJQ8NI35 1801 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 TNCP24821 2201 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 CHD1O14646 1710 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 SPHKAPQ2M3C7 1700 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 MON2Q7Z3U7 1717 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 ARAP2Q8WZ64 1704 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 PLXNA1Q9UIW2 1896 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 A2ML1A8K2U0 1454 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 ABCC10Q5T3U5 1492 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 BCL9LQ86UU0 1499 aa0.61□□□□□ -2.31
TOM1L1-215ENST00000572905 MYH4Q9Y623 1939 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 MAPKBP1O60336 1514 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 KDM5AP29375 1690 aaKnown RBP0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 PSME4Q14997 1843 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 ARFGEF1Q9Y6D6 1849 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 TRAV30A0A087WSZ9 112 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 FAM24AA6NFZ4 105 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 APOC4-APOC2K7ER74 178 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 APOC2P02655 101 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 SPINK8P0C7L1 97 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 IFITM1P13164 125 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 SNCAP37840 140 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 HSD52Q0P140 79 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 Q56UQ5 140 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 COL5A1-AS1Q5SY13 56 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 SNRNP25Q9BV90 132 aaKnown RBP0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 SERP1Q9Y6X1 66 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 TNS1Q9HBL0 1735 aaKnown RBP0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 NRXN2Q9P2S2 1712 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 PDCD11Q14690 1871 aaKnown RBP0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 CCDC18Q5T9S5 1454 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 PLEKHH2Q8IVE3 1493 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 MUC22E2RYF6 1773 aaPredicted RBP0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 PPLO60437 1756 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 JMJD1CQ15652 2540 aa0.6□□□□□ -2.31
TOM1L1-215ENST00000572905 CLTCQ00610 1675 aaKnown RBP0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 ARHGAP5Q13017 1502 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 USP24Q9UPU5 2620 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 LRRIQ1Q96JM4 1722 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 PIGBOS1A0A0B4J2F0 54 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 UBA52P62987 128 aaKnown RBP0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 RBM3P98179 157 aaKnown RBP0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 Q6AWC8 147 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 TTC9CQ8N5M4 171 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 VAMP8Q9BV40 100 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 SPANXDQ9BXN6 97 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 AGPAT4-IT1Q9H0P7 198 aa0.59□□□□□ -2.31
TOM1L1-215ENST00000572905 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.32
TOM1L1-215ENST00000572905 TOP2BQ02880 1626 aa0.59□□□□□ -2.32
TOM1L1-215ENST00000572905 FYCO1Q9BQS8 1478 aa0.59□□□□□ -2.32
TOM1L1-215ENST00000572905 SBF2Q86WG5 1849 aa0.59□□□□□ -2.32
TOM1L1-215ENST00000572905 DCAF1Q9Y4B6 1507 aa0.59□□□□□ -2.32
TOM1L1-215ENST00000572905 MARF1Q9Y4F3 1742 aaKnown RBP0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 LAMC3Q9Y6N6 1575 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 NSD3Q9BZ95 1437 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 SHROOM2Q13796 1616 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 TRBV10-3A0A0K0K1G6 114 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 PVALEFA0A1B0GWK0 134 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 OOSP1A8MZH6 123 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 MPC2O95563 127 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 TNFP01375 233 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 BTG2P78543 158 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 INSL4Q14641 139 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 C12orf73Q69YU5 71 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 LSM10Q969L4 123 aaKnown RBP0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 AQP10Q96PS8 301 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 PMCHL2Q9BQD1 86 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 SNHG12Q9BXW3 62 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 PRO1933Q9H354 126 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 IER3IP1Q9Y5U9 82 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 V9GYS6 101 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 F5P12259 2224 aa0.58□□□□□ -2.32
TOM1L1-215ENST00000572905 KDM6BO15054 1643 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 CPSF1Q10570 1443 aaKnown RBP0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 PPIP5K1Q6PFW1 1433 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 SHANK2Q9UPX8 1470 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 TRGV1A0A0A0MS02 117 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 UBE2L5PA0A1B0GUS4 154 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 CLPSL1A2RUU4 121 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 CRYM-AS1A6NIL9 109 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 TMEM14DPA8MWL7 114 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 TMEM262E9PQX1 116 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 GNGT2O14610 69 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 LINC00032P0C843 101 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 ATP5EP56381 51 aaPredicted RBP0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 GNG11P61952 73 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 UBE2L3P68036 154 aaKnown RBP0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 CCL8P80075 99 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 C9orf62Q8N4C0 152 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 DPY30Q9C005 99 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 ABCC3O15438 1527 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
TOM1L1-215ENST00000572905 SCAPERQ9BY12 1400 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms