RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RNASEKQ6P5S7 137 aaKnown RBP3.72□□□□□ -1.81
SF3B3-214ENST00000572365 TMEM14EPQ6UXP3 125 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 Q6ZUT4 128 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 SMIM20Q8N5G0 67 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 OR10J6PQ8NGY7 276 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 DYNLRB2Q8TF09 96 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 FBXL15Q9H469 300 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 CALYQ9NYX4 217 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 OR1A1Q9P1Q5 309 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 POLDIP2Q9Y2S7 368 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 V9GYV3 84 aa3.72□□□□□ -1.81
SF3B3-214ENST00000572365 UBE2L5PA0A1B0GUS4 154 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 E9PLD3 99 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 J3KT08 172 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 CGB3P0DN86 165 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 CGB7P0DN87 165 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 KIR2DS2P43631 304 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 RPL30P62888 115 aaKnown RBP3.71□□□□□ -1.82
SF3B3-214ENST00000572365 HAMPP81172 84 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 ZNF816Q0VGE8 651 aaPredicted RBP3.71□□□□□ -1.82
SF3B3-214ENST00000572365 TNXAQ16473 311 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 TMEM78Q5T7P6 136 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 C1orf134Q5TEV5 83 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 Q5VSD8 79 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 EBLN2Q6P2I7 272 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 Q6P435 159 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 PAXXQ9BUH6 204 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 NPCDR1Q9BY65 106 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 SLC25A22Q9H936 323 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 GNG12Q9UBI6 72 aa3.71□□□□□ -1.82
SF3B3-214ENST00000572365 TRBV6-6A0A0A6YYG2 114 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 A0A1B0GWB2 263 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 A0A1W2PRE2 83 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 A8MWL6 223 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 ZNF688P0C7X2 276 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 HBBP68871 147 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 CATR1Q13166 79 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 LAGE3Q14657 143 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 PSG5Q15238 335 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 SPANXN5Q5MJ07 72 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 Q6AWC8 147 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 Q6ZR54 194 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 Q6ZVH6 145 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 ATOH7Q8N100 152 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 FAM19A2Q8N3H0 131 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 NUP35Q8NFH5 326 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 BORCS8Q96FH0 119 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 PPDPFQ9H3Y8 114 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
SF3B3-214ENST00000572365 IGKV1-12A0A0C4DH73 117 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 GGTLC3B5MD39 225 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 PGLYRP1O75594 196 aaPredicted RBP3.69□□□□□ -1.82
SF3B3-214ENST00000572365 NAPSAO96009 420 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 IGKV1D-12P01611 117 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 SCGB1C2P0DMR2 95 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 MGST1P10620 155 aaKnown RBP3.69□□□□□ -1.82
SF3B3-214ENST00000572365 HLA-DMBP28068 263 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
SF3B3-214ENST00000572365 PLGLAQ15195 96 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 C2orf91Q6ZV80 131 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 C6orf201Q7Z4U5 140 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 TMEM61Q8N0U2 210 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 CYYR1Q96J86 154 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 VSIRQ9H7M9 311 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 S4R3C0 116 aa3.69□□□□□ -1.82
SF3B3-214ENST00000572365 A0A087WX48 190 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 NBR2O15453 112 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 SNAI2O43623 268 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 IGLV3-1P01715 115 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 IGHV3-23P01764 117 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 IL4P05112 153 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 CRYGBP07316 175 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 GIG44P09565 113 aaPredicted RBP3.68□□□□□ -1.82
SF3B3-214ENST00000572365 NPPCP23582 126 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 GCHFRP30047 84 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 ETDBQ3ZM63 59 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 APRG1Q8IVJ8 170 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 UBE2DNLQ8IWF7 75 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 GAPTQ8N292 157 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 VSIG2Q96IQ7 327 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 Q9UF83 564 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 KLF12Q9Y4X4 402 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 RFNGQ9Y644 331 aa3.68□□□□□ -1.82
SF3B3-214ENST00000572365 LRP1Q07954 4544 aaKnown RBP3.67□□□□□ -1.82
SF3B3-214ENST00000572365 A8MWV9 139 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 C15orf65H3BRN8 121 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 SLC25A5P05141 298 aaKnown RBP3.67□□□□□ -1.82
SF3B3-214ENST00000572365 C8orf88P0DMB2 117 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 ORM2P19652 201 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 APOC4P55056 127 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 PRR4Q16378 134 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 CENPWQ5EE01 88 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 MEIG1Q5JSS6 88 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 ZNF818PQ6ZRF7 136 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 PDPNQ86YL7 162 aa3.67□□□□□ -1.82
SF3B3-214ENST00000572365 CEND1Q8N111 149 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms