RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 CRPP02741 224 aa9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 RAB4AP20338 218 aa9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 FUSP35637 526 aaKnown RBP eCLIP9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 RBX1P62877 108 aa9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 ENHOQ6UWT2 76 aa9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 Q8N814 137 aa9.17□□□□□ -0.94
HERPUD1-218ENST00000569569 TRBV6-5A0A0K0K1A5 114 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 SDHAF1A6NFY7 115 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 AMTP48728 403 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 IFITM2Q01629 132 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 MAPKAPK5-AS1Q8N8E1 139 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 DEFB104AQ8WTQ1 72 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 RNF185Q96GF1 192 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 HERC2O95714 4834 aa9.16□□□□□ -0.94
HERPUD1-218ENST00000569569 UBE2L6O14933 153 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 NCR2O95944 276 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 MIAQ16674 131 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 AMN1Q8IY45 258 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 MRAP2Q96G30 205 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 C1orf43Q9BWL3 253 aa9.15□□□□□ -0.94
HERPUD1-218ENST00000569569 A0A1B0GW15 77 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 I3L3M4 83 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 PPP1R2P9O14990 202 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 GAS8-AS1O95177 125 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 PNRC1Q12796 327 aaPredicted RBP9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 BAALCQ8WXS3 180 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 ST20Q9HBF5 79 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 PRR34Q9NV39 138 aa9.14□□□□□ -0.95
HERPUD1-218ENST00000569569 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
HERPUD1-218ENST00000569569 PMCHP20382 165 aa9.13□□□□□ -0.95
HERPUD1-218ENST00000569569 GCSHP23434 173 aa9.13□□□□□ -0.95
HERPUD1-218ENST00000569569 WFDC2Q14508 124 aa9.13□□□□□ -0.95
HERPUD1-218ENST00000569569 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
HERPUD1-218ENST00000569569 LECT2O14960 151 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 PPP1R17O96001 155 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 APCSP02743 223 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 CAMPP49913 170 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 POLR2KP53803 58 aaKnown RBP9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 FAM104BQ5XKR9 115 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 ANAPC16Q96DE5 110 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 TMEM70Q9BUB7 260 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 RYR1P21817 5038 aa9.12□□□□□ -0.95
HERPUD1-218ENST00000569569 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 H7C423 109 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 S100A8P05109 93 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 RPS10P46783 165 aaKnown RBP9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 REG3AQ06141 175 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 UQCC3Q6UW78 93 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 CLPSL2Q6UWE3 100 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 HSPG2P98160 4391 aa9.11□□□□□ -0.95
HERPUD1-218ENST00000569569 LINC00862A6NCI5 91 aa9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 SMKR1H3BMG3 65 aa9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 MT-ND4LP03901 98 aa9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 HBBP68871 147 aa9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 MRPL51Q4U2R6 128 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 MRPL54Q6P161 138 aaKnown RBP9.1□□□□□ -0.95
HERPUD1-218ENST00000569569 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 TRBV27A0A0K0K1C4 114 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 A0A1B0GXF2 115 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 F8W036 122 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 VCYO14598 125 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 AMMECR1LQ6DCA0 310 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 NRACQ8N912 160 aa9.09□□□□□ -0.95
HERPUD1-218ENST00000569569 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 IGKV2-29A2NJV5 120 aaPredicted RBP9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 TSHBP01222 138 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 HLA-DQA1P01909 254 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 ESDP10768 282 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 SUMO2P61956 95 aaKnown RBP9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 C14orf177Q52M58 125 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 ATP5L2Q7Z4Y8 100 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 TMEM242Q9NWH2 141 aa9.08□□□□□ -0.96
HERPUD1-218ENST00000569569 TMEM218A2RU14 115 aa9.07□□□□□ -0.96
HERPUD1-218ENST00000569569 FGF6P10767 208 aa9.07□□□□□ -0.96
HERPUD1-218ENST00000569569 CKS2P33552 79 aa9.07□□□□□ -0.96
HERPUD1-218ENST00000569569 RNASEKQ6P5S7 137 aaKnown RBP9.07□□□□□ -0.96
HERPUD1-218ENST00000569569 KRTAP26-1Q6PEX3 210 aa9.07□□□□□ -0.96
HERPUD1-218ENST00000569569 IGLV10-54A0A075B6I4 117 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 TRBV24-1A0A075B6N3 115 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 ZNF25P17030 456 aaPredicted RBP9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 XGP55808 180 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 BTF3L4Q96K17 158 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
HERPUD1-218ENST00000569569 USP17L23D6RBM5 183 aa9.05□□□□□ -0.96
HERPUD1-218ENST00000569569 ADCYAP1P18509 176 aa9.05□□□□□ -0.96
HERPUD1-218ENST00000569569 FCER1GP30273 86 aa9.05□□□□□ -0.96
HERPUD1-218ENST00000569569 TMEM101Q96IK0 257 aa9.05□□□□□ -0.96
HERPUD1-218ENST00000569569 C7orf77A4D0Y5 90 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 D6R8Y8 96 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 PPBPP02775 128 aa9.04□□□□□ -0.96
HERPUD1-218ENST00000569569 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms