RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	IGLV2-18	A0A075B6J9	118 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499		A0A087WX48	190 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499	DNAH10OS	P0CZ25	163 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499	KIAA1644	Q3SXP7	199 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499	C10orf126	Q8N4M7	172 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499	SMIM2	Q9BVW6	85 aa		10.19	□□□□□ -0.78
KLHDC4-223	ENST00000568499	RAB5A	P20339	215 aa		10.18	□□□□□ -0.78
KLHDC4-223	ENST00000568499	LINC01556	Q5JQF7	62 aa		10.18	□□□□□ -0.78
KLHDC4-223	ENST00000568499	NTM-AS1	Q6ZSK4	140 aa		10.18	□□□□□ -0.78
KLHDC4-223	ENST00000568499	CHCHD7	Q9BUK0	85 aa		10.18	□□□□□ -0.78
KLHDC4-223	ENST00000568499	NBDY	A0A0U1RRE5	68 aa		10.17	□□□□□ -0.78
KLHDC4-223	ENST00000568499	LOC389332	A0A1B0GUA5	103 aa		10.17	□□□□□ -0.78
KLHDC4-223	ENST00000568499	SMAGP	Q0VAQ4	97 aa		10.17	□□□□□ -0.78
KLHDC4-223	ENST00000568499	NIT1	Q86X76	327 aa		10.17	□□□□□ -0.78
KLHDC4-223	ENST00000568499	PRSS47	A8MTI9	375 aa		10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499		H7C423	109 aa		10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499	TSHB	P01222	138 aa		10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499	DEFB104A	Q8WTQ1	72 aa		10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499	TMEM18	Q96B42	140 aa		10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499	ALKBH7	Q9BT30	221 aa	Predicted RBP	10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499	NXT2	Q9NPJ8	142 aa	Known RBP	10.16	□□□□□ -0.78
KLHDC4-223	ENST00000568499		M0R2N4	97 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	SCO1	O75880	301 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	IGHV3-30	P01768	117 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	IGHV3-33	P01772	117 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	IGHV3-30-3	P0DP02	117 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	IGHV3-30-5	P0DP03	117 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	GAGE6	Q13070	117 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	AMMECR1L	Q6DCA0	310 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499		Q8N8P6	123 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	PRSS3P2	Q8NHM4	247 aa		10.15	□□□□□ -0.78
KLHDC4-223	ENST00000568499	ALMS1	Q8TCU4	4167 aa		10.14	□□□□□ -0.79
KLHDC4-223	ENST00000568499	COLCA2	A8K830	154 aa		10.14	□□□□□ -0.79
KLHDC4-223	ENST00000568499		K7EMI3	77 aa		10.14	□□□□□ -0.79
KLHDC4-223	ENST00000568499	BTF3	P20290	206 aa	Known RBP	10.14	□□□□□ -0.79
KLHDC4-223	ENST00000568499	G0S2	P27469	103 aa		10.14	□□□□□ -0.79
KLHDC4-223	ENST00000568499	TMEM101	Q96IK0	257 aa		10.13	□□□□□ -0.79
KLHDC4-223	ENST00000568499	ESD	P10768	282 aa		10.12	□□□□□ -0.79
KLHDC4-223	ENST00000568499	ORMDL2	Q53FV1	153 aa		10.12	□□□□□ -0.79
KLHDC4-223	ENST00000568499	RNASEK	Q6P5S7	137 aa	Known RBP	10.12	□□□□□ -0.79
KLHDC4-223	ENST00000568499	LYST	Q99698	3801 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499		A0A1B0GUV1	79 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	ZNF25	P17030	456 aa	Predicted RBP	10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	IFI27	P40305	119 aa	Predicted RBP	10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	RAB5B	P61020	215 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	LAGE3	Q14657	143 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	DGAT2L7P	Q6IED9	249 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499		Q6ZR54	194 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	FA2H	Q7L5A8	372 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	NFE4	Q86UQ8	179 aa		10.11	□□□□□ -0.79
KLHDC4-223	ENST00000568499	TRAV8-3	A0A0A6YYJ7	113 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	IBA57-AS1	B1ANH7	110 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	ANG	P03950	147 aa	Known RBP	10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	TRGC2	P03986	189 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	RBX1	P62877	108 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	MPV17L2	Q567V2	206 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	C1orf134	Q5TEV5	83 aa		10.1	□□□□□ -0.79
KLHDC4-223	ENST00000568499	CRP	P02741	224 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	FGF6	P10767	208 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499		Q0VG73	95 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	C6orf223	Q8N319	242 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499		Q8N976	141 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	C20orf203	Q8NBC4	194 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	OR5A1	Q8NGJ0	315 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	KLK12	Q9UKR0	248 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	VPS13D	Q5THJ4	4388 aa		10.09	□□□□□ -0.79
KLHDC4-223	ENST00000568499	RMI2	Q96E14	147 aa		10.08	□□□□□ -0.8
KLHDC4-223	ENST00000568499	DNAH1	Q9P2D7	4330 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	LINC01549	A6NIU2	74 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	MRPL52	Q86TS9	123 aa	Known RBP	10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499		Q8N3U1	123 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	C18orf32	Q8TCD1	76 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	UBE2W	Q96B02	151 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	CYSLTR1	Q9Y271	337 aa		10.07	□□□□□ -0.8
KLHDC4-223	ENST00000568499	LINC00614	P0C842	121 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	TIMM21	Q9BVV7	248 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	TM2D2	Q9BX73	214 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	KRTAP1-5	Q9BYS1	174 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	SPANXA1	Q9NS26	97 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	AP5S1	Q9NUS5	200 aa		10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	CSDC2	Q9Y534	153 aa	Known RBP	10.06	□□□□□ -0.8
KLHDC4-223	ENST00000568499	BAGE3	Q86Y29	109 aa		10.05	□□□□□ -0.8
KLHDC4-223	ENST00000568499	LINC00269	Q8N2A0	174 aa		10.05	□□□□□ -0.8
KLHDC4-223	ENST00000568499		Q9HAA7	133 aa		10.05	□□□□□ -0.8
KLHDC4-223	ENST00000568499	COX11	Q9Y6N1	276 aa		10.05	□□□□□ -0.8
KLHDC4-223	ENST00000568499	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	IGLV4-60	A0A075B6I1	120 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	LINC01546	A6NGU7	62 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	REG3A	Q06141	175 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	MIA	Q16674	131 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	C2orf66	Q6UXQ4	117 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	UBE2D4	Q9Y2X8	147 aa		10.04	□□□□□ -0.8
KLHDC4-223	ENST00000568499	PSCA	O43653	123 aa		10.03	□□□□□ -0.8
KLHDC4-223	ENST00000568499	RPL39	P62891	51 aa	Known RBP	10.03	□□□□□ -0.8
KLHDC4-223	ENST00000568499	ZNF664	Q8N3J9	261 aa		10.03	□□□□□ -0.8
KLHDC4-223	ENST00000568499	CHCHD1	Q96BP2	118 aa	Known RBP	10.03	□□□□□ -0.8
KLHDC4-223	ENST00000568499	SACS	Q9NZJ4	4579 aa		10.03	□□□□□ -0.8
KLHDC4-223	ENST00000568499	TRAV8-4	A0A0B4J246	113 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms