RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 Q8N8P6 123 aa10.24□□□□□ -0.77
SPG7-213ENST00000566221 PACRGQ96M98 296 aaPredicted RBP10.24□□□□□ -0.77
SPG7-213ENST00000566221 GTSF1LQ9H1H1 148 aa10.24□□□□□ -0.77
SPG7-213ENST00000566221 VCYO14598 125 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 SERF1AO75920 110 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 TIRAPP58753 221 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 TMEM97Q5BJF2 176 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 FA2HQ7L5A8 372 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 TMEM70Q9BUB7 260 aa10.23□□□□□ -0.77
SPG7-213ENST00000566221 G0S2P27469 103 aa10.22□□□□□ -0.77
SPG7-213ENST00000566221 POLR2KP53803 58 aaKnown RBP10.22□□□□□ -0.77
SPG7-213ENST00000566221 CCL18P55774 89 aa10.22□□□□□ -0.77
SPG7-213ENST00000566221 IQCJQ1A5X6 159 aa10.22□□□□□ -0.77
SPG7-213ENST00000566221 SMIM2Q9BVW6 85 aa10.22□□□□□ -0.77
SPG7-213ENST00000566221 AP5S1Q9NUS5 200 aa10.22□□□□□ -0.77
SPG7-213ENST00000566221 IGHV3-38A0A0C4DH36 116 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 TRBV27A0A0K0K1C4 114 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 LOC389332A0A1B0GUA5 103 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 HSBP1O75506 76 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 S100A2P29034 98 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
SPG7-213ENST00000566221 LYPD5Q6UWN5 251 aa10.21□□□□□ -0.77
SPG7-213ENST00000566221 IGLV2-18A0A075B6J9 118 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 I3L3M4 83 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 COTL1Q14019 142 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 ESRGQ1W209 222 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 RNASEKQ6P5S7 137 aaKnown RBP10.2□□□□□ -0.78
SPG7-213ENST00000566221 UBE2DNLQ8IWF7 75 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 HIST3H2BBQ8N257 126 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 TMEM18Q96B42 140 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 KIR2DL4Q99706 377 aa10.2□□□□□ -0.78
SPG7-213ENST00000566221 LINC01549A6NIU2 74 aa10.19□□□□□ -0.78
SPG7-213ENST00000566221 LELP1Q5T871 98 aa10.19□□□□□ -0.78
SPG7-213ENST00000566221 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
SPG7-213ENST00000566221 MRPS16Q9Y3D3 137 aaKnown RBP10.19□□□□□ -0.78
SPG7-213ENST00000566221 PLECQ15149 4684 aaKnown RBP10.19□□□□□ -0.78
SPG7-213ENST00000566221 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
SPG7-213ENST00000566221 LINC00310P59036 64 aa10.18□□□□□ -0.78
SPG7-213ENST00000566221 ORMDL2Q53FV1 153 aa10.18□□□□□ -0.78
SPG7-213ENST00000566221 LINC00588Q9Y4M8 146 aa10.18□□□□□ -0.78
SPG7-213ENST00000566221 RYR2Q92736 4967 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 TRBV25-1A0A075B6N4 114 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 IGHV1-24A0A0C4DH33 117 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 NUPR1O60356 82 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 TSHBP01222 138 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 FCER1GP30273 86 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 LAGE3Q14657 143 aa10.17□□□□□ -0.78
SPG7-213ENST00000566221 TRAV8-6A0A0B4J262 113 aa10.16□□□□□ -0.78
SPG7-213ENST00000566221 AMTP48728 403 aa10.16□□□□□ -0.78
SPG7-213ENST00000566221 LGALS9CQ6DKI2 356 aa10.16□□□□□ -0.78
SPG7-213ENST00000566221 NTM-AS1Q6ZSK4 140 aa10.16□□□□□ -0.78
SPG7-213ENST00000566221 UPK3BQ9BT76 320 aa10.16□□□□□ -0.78
SPG7-213ENST00000566221 LCE6AA0A183 80 aa10.15□□□□□ -0.78
SPG7-213ENST00000566221 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
SPG7-213ENST00000566221 HIST1H2BLQ99880 126 aa10.15□□□□□ -0.78
SPG7-213ENST00000566221 TMEM243Q9BU79 118 aa10.15□□□□□ -0.78
SPG7-213ENST00000566221 HBDP02042 147 aa10.14□□□□□ -0.79
SPG7-213ENST00000566221 LINC00476Q8WZB0 136 aa10.14□□□□□ -0.79
SPG7-213ENST00000566221 HSPB8Q9UJY1 196 aa10.14□□□□□ -0.79
SPG7-213ENST00000566221 LYSTQ99698 3801 aa10.14□□□□□ -0.79
SPG7-213ENST00000566221 ALMS1Q8TCU4 4167 aa10.13□□□□□ -0.79
SPG7-213ENST00000566221 LOC105371267A0A1B0GV96 52 aa10.13□□□□□ -0.79
SPG7-213ENST00000566221 PKIAP61925 76 aa10.13□□□□□ -0.79
SPG7-213ENST00000566221 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
SPG7-213ENST00000566221 CHCHD5Q9BSY4 110 aa10.13□□□□□ -0.79
SPG7-213ENST00000566221 IFITM10A6NMD0 228 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 UBE2L6O14933 153 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 SIVA1O15304 175 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 FABP4P15090 132 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 PDZD11Q5EBL8 140 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 CHCHD7Q9BUK0 85 aa10.12□□□□□ -0.79
SPG7-213ENST00000566221 H7C423 109 aa10.11□□□□□ -0.79
SPG7-213ENST00000566221 LEPROTL1O95214 131 aa10.11□□□□□ -0.79
SPG7-213ENST00000566221 LY6G6CO95867 125 aa10.11□□□□□ -0.79
SPG7-213ENST00000566221 FAM19A2Q8N3H0 131 aa10.11□□□□□ -0.79
SPG7-213ENST00000566221 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
SPG7-213ENST00000566221 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
SPG7-213ENST00000566221 ATP5LO75964 103 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 SMAGPQ0VAQ4 97 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 GAGE6Q13070 117 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 C20orf203Q8NBC4 194 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 Q9H8V8 135 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 CYSLTR1Q9Y271 337 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 VPS13DQ5THJ4 4388 aa10.09□□□□□ -0.79
SPG7-213ENST00000566221 A0A087WX48 190 aa10.08□□□□□ -0.8
SPG7-213ENST00000566221 A0A096LNJ9 63 aa10.08□□□□□ -0.8
SPG7-213ENST00000566221 TMEM262E9PQX1 116 aa10.08□□□□□ -0.8
SPG7-213ENST00000566221 NPSP0C0P6 89 aa10.08□□□□□ -0.8
SPG7-213ENST00000566221 BTF3P20290 206 aaKnown RBP10.08□□□□□ -0.8
SPG7-213ENST00000566221 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
SPG7-213ENST00000566221 ZNF25P17030 456 aaPredicted RBP10.07□□□□□ -0.8
SPG7-213ENST00000566221 PMCHL1Q16048 86 aa10.07□□□□□ -0.8
SPG7-213ENST00000566221 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
SPG7-213ENST00000566221 AMMECR1LQ6DCA0 310 aa10.07□□□□□ -0.8
SPG7-213ENST00000566221 C2orf66Q6UXQ4 117 aa10.07□□□□□ -0.8
SPG7-213ENST00000566221 MRPL52Q86TS9 123 aaKnown RBP10.07□□□□□ -0.8
SPG7-213ENST00000566221 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms