RNA–Protein interactions for RNA: ENST00000565113.5

DNAAF4-CCPG1-201, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene DNAAF4-CCPG1, Length 4,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-201ENST00000565113 TIMM21Q9BVV7 248 aa3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 DAZ3Q9NR90 486 aaKnown RBP3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 USP9YO00507 2555 aaPredicted RBP3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 POLQO75417 2590 aa3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TRBV7-3A0A075B6L6 115 aa3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 UBE2L6O14933 153 aa3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 LY6G6DO95868 133 aa3.69□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SVEP1Q4LDE5 3571 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV3-38A0A0C4DH36 116 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 Q6ZSN1 163 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 RNASE8Q8TDE3 154 aaKnown RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 NOP10Q9NPE3 64 aaKnown RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SPANXB1Q9NS25 103 aaPredicted RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 PTPN13Q12923 2485 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 A0A0J9YXV3 536 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TMEM238C9JI98 176 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TINCRA0A1B0GVN0 87 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGKV2-29A2NJV5 120 aaPredicted RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGLL5B9A064 214 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 K7ERU9 68 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IL17DQ8TAD2 202 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TMEM101Q96IK0 257 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 CHCHD7Q9BUK0 85 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 FBN2P35556 2912 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 VPS13CQ709C8 3753 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 ZNF22P17026 224 aaPredicted RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 AMELXQ99217 191 aa3.68□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 UTP20O75691 2785 aaKnown RBP3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV3-64A0A075B6Q5 118 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TRGV4A0A0C4DH28 118 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 INSL3P51460 131 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 MRPS36P82909 103 aaKnown RBP3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 Q6ZTI0 123 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 DOPEY2Q9Y3R5 2298 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 A0A0J9YY99 117 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 RNF151Q2KHN1 245 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SLC25A29Q8N8R3 303 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE7O76087 117 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE12FP0CL80 117 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE12GP0CL81 117 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE12IP0CL82 117 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 C9orf66Q5T8R8 295 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SMR3AQ99954 134 aa3.67□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 A0A1B0GWB2 263 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE12JA6NER3 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE4Q13068 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE5Q13069 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GAGE13Q4V321 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 PGPEP1Q9NXJ5 209 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV1-58A0A0C4DH39 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 ADARB2-AS1A8MUL3 147 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 APOMO95445 188 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 HERVK_113P63121 156 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 OCIAD2Q56VL3 154 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 RNASE13Q5GAN3 156 aaKnown RBP3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 Q6ZUT4 128 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 ABCA12Q86UK0 2595 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TMEM243Q9BU79 118 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 AGRNO00468 2067 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TSPEAR-AS2P59090 65 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 CIRBPQ14011 172 aaKnown RBP3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 LINC00482Q8N8I6 264 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 COPS9Q8WXC6 57 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 OVOL2Q9BRP0 275 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 WFDC10AQ9H1F0 79 aa3.66□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 EPG5Q9HCE0 2579 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TRBV6-4A0A1B0GX49 114 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 F8W1H4 67 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 H7C423 109 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 TIRAPP58753 221 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 UBE2D3P61077 147 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 UBE2D2P62837 147 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 VPS25Q9BRG1 176 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 LOC107984156A0A0G2JMH3 177 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV3-30P01768 117 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SPINK8P0C7L1 97 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 SCGB1C2P0DMR2 95 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 IGHV3-30-5P0DP03 117 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 ARL17AQ8IVW1 177 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 GTSF1LQ9H1H1 148 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 NDUFA12Q9UI09 145 aa3.65□□□□□ -1.82
DNAAF4-CCPG1-201ENST00000565113 INAFM1C9JVW0 142 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 J3QR89 54 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 UBE2D1P51668 147 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 ZFHX3Q15911 3703 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 SMIM9A6NGZ8 99 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 PSMB2P49721 201 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 Q1RN00 199 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 VSIG2Q96IQ7 327 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 C19orf73Q9NVV2 129 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 CSDC2Q9Y534 153 aaKnown RBP3.65□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 CRYBG3Q68DQ2 2970 aa3.64□□□□□ -1.83
DNAAF4-CCPG1-201ENST00000565113 A0A0J9YXY3 114 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 147.5 ms