RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 RPL39P62891 51 aaKnown RBP13.88□□□□□ -0.19
CLN6-205ENST00000564846 FAM222AQ5U5X8 452 aa13.88□□□□□ -0.19
CLN6-205ENST00000564846 DKK2Q9UBU2 259 aa13.88□□□□□ -0.19
CLN6-205ENST00000564846 A0A087WX48 190 aa13.87□□□□□ -0.19
CLN6-205ENST00000564846 COTL1Q14019 142 aa13.87□□□□□ -0.19
CLN6-205ENST00000564846 DAZ4Q86SG3 579 aaKnown RBP13.87□□□□□ -0.19
CLN6-205ENST00000564846 DAZ3Q9NR90 486 aaKnown RBP13.87□□□□□ -0.19
CLN6-205ENST00000564846 hDV102S1A0JD36 115 aa13.86□□□□□ -0.19
CLN6-205ENST00000564846 BAALCQ8WXS3 180 aa13.86□□□□□ -0.19
CLN6-205ENST00000564846 PHLDA1Q8WV24 401 aaPredicted RBP13.86□□□□□ -0.19
CLN6-205ENST00000564846 PRADC1Q9BSG0 188 aa13.86□□□□□ -0.19
CLN6-205ENST00000564846 UBE2D3P61077 147 aa13.85□□□□□ -0.19
CLN6-205ENST00000564846 UBE2D2P62837 147 aa13.85□□□□□ -0.19
CLN6-205ENST00000564846 IGHV3-38A0A0C4DH36 116 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 GAGE12JA6NER3 117 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 LINC00587B1AMM8 73 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 DPM2O94777 84 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 GAGE1Q13065 139 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 GAGE4Q13068 117 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 GAGE5Q13069 117 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 GAGE13Q4V321 117 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 MDFIQ99750 246 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 MRPL35Q9NZE8 188 aaKnown RBP13.84□□□□□ -0.19
CLN6-205ENST00000564846 PKD1L1Q8TDX9 2849 aa13.84□□□□□ -0.19
CLN6-205ENST00000564846 DEFB4AO15263 64 aa13.83□□□□□ -0.19
CLN6-205ENST00000564846 IGKCP01834 107 aa13.83□□□□□ -0.19
CLN6-205ENST00000564846 MIEN1Q9BRT3 115 aa13.83□□□□□ -0.19
CLN6-205ENST00000564846 CHCHD7Q9BUK0 85 aa13.83□□□□□ -0.19
CLN6-205ENST00000564846 F8VRH5 84 aa13.83□□□□□ -0.2
CLN6-205ENST00000564846 IGLC3P0DOY3 106 aa13.83□□□□□ -0.2
CLN6-205ENST00000564846 HHLA3Q9XRX5 114 aa13.83□□□□□ -0.2
CLN6-205ENST00000564846 PYGO1Q9Y3Y4 419 aa13.83□□□□□ -0.2
CLN6-205ENST00000564846 SPART-AS1P0CW21 52 aa13.82□□□□□ -0.2
CLN6-205ENST00000564846 PLNP26678 52 aa13.82□□□□□ -0.2
CLN6-205ENST00000564846 CHTOPQ9Y3Y2 248 aaKnown RBP13.82□□□□□ -0.2
CLN6-205ENST00000564846 DNAH3Q8TD57 4116 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 PRSS29PA6NIE9 313 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 PMVKQ15126 192 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 UQCR10Q9UDW1 63 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 NBEAL2Q6ZNJ1 2754 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 DAD1P61803 113 aa13.81□□□□□ -0.2
CLN6-205ENST00000564846 NPSP0C0P6 89 aa13.8□□□□□ -0.2
CLN6-205ENST00000564846 PAPPA-AS1Q5QFB9 102 aa13.8□□□□□ -0.2
CLN6-205ENST00000564846 TEX48A0A1B0GUV7 120 aa13.79□□□□□ -0.2
CLN6-205ENST00000564846 GTSF1LQ9H1H1 148 aa13.79□□□□□ -0.2
CLN6-205ENST00000564846 CST9LQ9H4G1 147 aa13.79□□□□□ -0.2
CLN6-205ENST00000564846 PRO0255Q9UI72 69 aa13.79□□□□□ -0.2
CLN6-205ENST00000564846 LOC100131303A0A0U1RQF7 123 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 CRYBA4P53673 196 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 STPG4Q8N801 248 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 C14orf144Q96I85 54 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 SPANXA1Q9NS26 97 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 CELA1Q9UNI1 258 aa13.78□□□□□ -0.2
CLN6-205ENST00000564846 IGLV4-3A0A075B6K6 122 aa13.77□□□□□ -0.21
CLN6-205ENST00000564846 LINC00694P0DN24 101 aa13.77□□□□□ -0.21
CLN6-205ENST00000564846 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
CLN6-205ENST00000564846 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.76□□□□□ -0.21
CLN6-205ENST00000564846 IGKV2-29A2NJV5 120 aaPredicted RBP13.76□□□□□ -0.21
CLN6-205ENST00000564846 ATP5G1P05496 136 aa13.76□□□□□ -0.21
CLN6-205ENST00000564846 DEFA6Q01524 100 aa13.76□□□□□ -0.21
CLN6-205ENST00000564846 ANKRD39Q53RE8 183 aa13.76□□□□□ -0.21
CLN6-205ENST00000564846 NTM-AS1Q6ZSK4 140 aa13.76□□□□□ -0.21
CLN6-205ENST00000564846 VCX2Q9H322 139 aa13.76□□□□□ -0.21
CLN6-205ENST00000564846 KPRPQ5T749 579 aaPredicted RBP13.76□□□□□ -0.21
CLN6-205ENST00000564846 OPRPNQ99935 248 aaPredicted RBP13.76□□□□□ -0.21
CLN6-205ENST00000564846 ZC2HC1BQ5TFG8 222 aa13.75□□□□□ -0.21
CLN6-205ENST00000564846 TIMM21Q9BVV7 248 aa13.75□□□□□ -0.21
CLN6-205ENST00000564846 RETNQ9HD89 108 aa13.75□□□□□ -0.21
CLN6-205ENST00000564846 TMEM97Q5BJF2 176 aa13.74□□□□□ -0.21
CLN6-205ENST00000564846 GYPEP15421 78 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 IGLV4-69A0A075B6H9 119 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 PAX4O43316 350 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 COX8AP10176 69 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 SMAGPQ0VAQ4 97 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 SLC25A34Q6PIV7 304 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 AMELXQ99217 191 aa13.73□□□□□ -0.21
CLN6-205ENST00000564846 TRBV25-1A0A075B6N4 114 aa13.72□□□□□ -0.21
CLN6-205ENST00000564846 CEMP1Q6PRD7 247 aaPredicted RBP13.72□□□□□ -0.21
CLN6-205ENST00000564846 SBSPONQ8IVN8 264 aa13.72□□□□□ -0.21
CLN6-205ENST00000564846 FAM104AQ969W3 186 aa13.72□□□□□ -0.21
CLN6-205ENST00000564846 C11orf68Q9H3H3 251 aaKnown RBP13.72□□□□□ -0.21
CLN6-205ENST00000564846 HNRNPA3P51991 378 aaKnown RBP13.71□□□□□ -0.21
CLN6-205ENST00000564846 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.21
CLN6-205ENST00000564846 TMEM243Q9BU79 118 aa13.71□□□□□ -0.21
CLN6-205ENST00000564846 H7C423 109 aa13.71□□□□□ -0.22
CLN6-205ENST00000564846 DGAT2L7PQ6IED9 249 aa13.71□□□□□ -0.22
CLN6-205ENST00000564846 MRPL52Q86TS9 123 aaKnown RBP13.71□□□□□ -0.22
CLN6-205ENST00000564846 CSDC2Q9Y534 153 aaKnown RBP13.71□□□□□ -0.22
CLN6-205ENST00000564846 K7EIL1 84 aa13.7□□□□□ -0.22
CLN6-205ENST00000564846 ATP6V0E2Q8NHE4 81 aa13.7□□□□□ -0.22
CLN6-205ENST00000564846 TRBV6-8A0A0A6YYG3 113 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 C11orf86A6NJI1 115 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 F5H768 121 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
CLN6-205ENST00000564846 FGF6P10767 208 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 NMUP48645 174 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 TCTAP57738 103 aa13.69□□□□□ -0.22
CLN6-205ENST00000564846 UBE2L6O14933 153 aa13.68□□□□□ -0.22
CLN6-205ENST00000564846 NFE4Q86UQ8 179 aa13.68□□□□□ -0.22
CLN6-205ENST00000564846 VSIG2Q96IQ7 327 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms