RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PRSS3P35030 304 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 ATP5IP56385 69 aaPredicted RBP3.28□□□□□ -1.88
HERC1-213ENST00000561359 CACNG7P62955 275 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 SRPXP78539 464 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 ERCC8Q13216 396 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 IL15RAQ13261 267 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 RAB31Q13636 194 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 VAMP3Q15836 100 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 LRRC37A5PQ49AS3 106 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 ZNF506Q5JVG8 444 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 RPL7L1Q6DKI1 246 aaKnown RBP3.28□□□□□ -1.88
HERC1-213ENST00000561359 SLC25A29Q8N8R3 303 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 FER1L6-AS1Q8NA97 138 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 LINC00477Q96M19 166 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 PLAC8Q9NZF1 115 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 PSORS1C2Q9UIG4 136 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 ANAPC10Q9UM13 185 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 PXMP4Q9Y6I8 212 aa3.28□□□□□ -1.88
HERC1-213ENST00000561359 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 BORCS7-ASMTA0A0B4J1R7 106 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 MAP1LC3B2A6NCE7 125 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 FBLL1A6NHQ2 334 aaKnown RBP3.27□□□□□ -1.89
HERC1-213ENST00000561359 CD3DP04234 171 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
HERC1-213ENST00000561359 S100A10P60903 97 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 CKS1BP61024 79 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 BAXQ07812 192 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 Q0VG73 95 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 RHOHQ15669 191 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 MUC21Q5SSG8 566 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 Q8TAT8 98 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 MRAP2Q96G30 205 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 SIGMAR1Q99720 223 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 MAP1LC3BQ9GZQ8 125 aa3.27□□□□□ -1.89
HERC1-213ENST00000561359 A0A087WX48 190 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 TRBV7-9A0A0J9YWB2 115 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 PGPA6NDG6 321 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 MRPS12O15235 138 aaKnown RBP3.26□□□□□ -1.89
HERC1-213ENST00000561359 CDS2O95674 445 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 LINC00869P0C866 280 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 RPL12P30050 165 aaKnown RBP3.26□□□□□ -1.89
HERC1-213ENST00000561359 SRSF9Q13242 221 aaKnown RBP eCLIP3.26□□□□□ -1.89
HERC1-213ENST00000561359 PPP1R1AQ13522 171 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 Q6ZN92 141 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 CYP2G1PQ6ZSU1 146 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 BPIFA4PQ86YQ2 179 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 PSMG3Q9BT73 122 aaPredicted RBP3.26□□□□□ -1.89
HERC1-213ENST00000561359 AGPAT4-IT1Q9H0P7 198 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 SDF2L1Q9HCN8 221 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 PAM16Q9Y3D7 125 aa3.26□□□□□ -1.89
HERC1-213ENST00000561359 IGHV3-73A0A0B4J1V6 119 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 TRAV1-1A0A0B4J248 108 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 TRBV6-4A0A1B0GX49 114 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 A0A1W2PPV4 95 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 GAGE12JA6NER3 117 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 M0R2P5 195 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 TAX1BP3O14907 124 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 ZNF253O75346 499 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 CRPP02741 224 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 IAPPP10997 89 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 CRISP2P16562 243 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 TAS2R30P59541 319 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 GAGE4Q13068 117 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 GAGE5Q13069 117 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 SPATA45Q537H7 98 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 PRR9Q5T870 116 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 UFSP1Q6NVU6 142 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 ZFAND2AQ8N6M9 145 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 PRR26Q8N8Z3 221 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 C5orf17Q8NAS9 161 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 OR10G9Q8NGN4 311 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 FAM19A4Q96LR4 140 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 SCGB3A2Q96PL1 93 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 SPANXA1Q9NS26 97 aa3.25□□□□□ -1.89
HERC1-213ENST00000561359 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.24□□□□□ -1.89
HERC1-213ENST00000561359 IGKV2-24A0A0C4DH68 120 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 hDV102S1A0JD36 115 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 PGPEP1LA6NFU8 196 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 M0R3E3 92 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 SFT2D2O95562 160 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 HINT1P49773 126 aaPredicted RBP3.24□□□□□ -1.89
HERC1-213ENST00000561359 PLP1P60201 277 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 CNBPP62633 177 aaKnown RBP3.24□□□□□ -1.89
HERC1-213ENST00000561359 HERV-K104P63124 156 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 COX19Q49B96 90 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 TMEM128Q5BJH2 165 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 TMEM78Q5T7P6 136 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 MRPL54Q6P161 138 aaKnown RBP3.24□□□□□ -1.89
HERC1-213ENST00000561359 FAM159AQ6UWV7 190 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 PATE2Q6UY27 113 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 Q6ZRP5 223 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 GTF2H5Q6ZYL4 71 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 LINC00305Q7Z4B0 112 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 CYB561D1Q8N8Q1 229 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 TMEM75Q8N9X5 138 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 CMTM2Q8TAZ6 248 aa3.24□□□□□ -1.89
HERC1-213ENST00000561359 TRAV9-1A0A075B6T8 112 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms