RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SMPXQ9UHP9 88 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 HSPB11Q9Y547 144 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 DOCK2Q92608 1830 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 SPEF2Q9C093 1822 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 ZNF236Q9UL36 1845 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 LRP6O75581 1613 aa-0.6□□□□□ -2.51
USP8-218ENST00000561330 LAMA5O15230 3695 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 PRKDCP78527 4128 aaKnown RBP-0.61□□□□□ -2.51
USP8-218ENST00000561330 TRBV20-1A0A075B6N2 111 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 TRBV6-1A0A0K0K1D8 114 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 A0A1B0GX51 115 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 CLPSL1A2RUU4 121 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 IL5P05113 134 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 SCTP09683 121 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 PIGYQ3MUY2 71 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 SMIM15Q7Z3B0 74 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 PSMG3Q9BT73 122 aaPredicted RBP-0.61□□□□□ -2.51
USP8-218ENST00000561330 SAR1AQ9NR31 198 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 GINS2Q9Y248 185 aa-0.61□□□□□ -2.51
USP8-218ENST00000561330 SVEP1Q4LDE5 3571 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 LRRC37A3O60309 1634 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 CTXND1A0A1B0GTU2 59 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 SNCGO76070 127 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 PIPP12273 146 aaPredicted RBP-0.62□□□□□ -2.51
USP8-218ENST00000561330 CCDC153Q494R4 210 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 MMGT1Q8N4V1 131 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 LINC00312Q9Y6C7 94 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 SBF2Q86WG5 1849 aa-0.62□□□□□ -2.51
USP8-218ENST00000561330 H0YJX3 145 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 PPP1R17O96001 155 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 DBIP07108 87 aaKnown RBP-0.63□□□□□ -2.51
USP8-218ENST00000561330 ZNF818PQ6ZRF7 136 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 SMIM4Q8WVI0 70 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 DDA1Q9BW61 102 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 R4GMQ9 66 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 ARHGEF10O15013 1369 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 FLGP20930 4061 aaPredicted RBP-0.63□□□□□ -2.51
USP8-218ENST00000561330 HERC2O95714 4834 aa-0.63□□□□□ -2.51
USP8-218ENST00000561330 LAMC1P11047 1609 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 DOCK1Q14185 1865 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 I3L2K1 104 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 M0R135 149 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 SPRR1BP22528 89 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 CBLN1P23435 193 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 CCL18P55774 89 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 SPTSSAQ969W0 71 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 SEC11CQ9BY50 192 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 AGPAT4-IT1Q9H0P7 198 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 SPANXCQ9NY87 97 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 FAT1Q14517 4588 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 LRRC37A2A6NM11 1700 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 PAPPAQ13219 1627 aa-0.64□□□□□ -2.51
USP8-218ENST00000561330 WDR7Q9Y4E6 1490 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 PATJQ8NI35 1801 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 FAM236AA0A1B0GUQ0 79 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 FAM236BA0A1B0GV22 79 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 TNFP01375 233 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 COX6B1P14854 86 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 RRAS2P62070 204 aaPredicted RBP-0.65□□□□□ -2.51
USP8-218ENST00000561330 HIST1H1AQ02539 215 aaPredicted RBP-0.65□□□□□ -2.51
USP8-218ENST00000561330 TMEM170BQ5T4T1 132 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 Q6ZUT4 128 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 SELENOSQ9BQE4 189 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 MRPL40Q9NQ50 206 aaKnown RBP-0.65□□□□□ -2.51
USP8-218ENST00000561330 PKHD1P08F94 4074 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 DAPK1P53355 1430 aa-0.65□□□□□ -2.51
USP8-218ENST00000561330 J3QR89 54 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 M0R2T5 61 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 SPINK4O60575 86 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 IGLC6P0CF74 106 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 MT4P47944 62 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 Q6JHZ5 121 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 SMIM3Q9BZL3 60 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 CASKIN1Q8WXD9 1431 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 KDM5AP29375 1690 aaKnown RBP-0.66□□□□□ -2.52
USP8-218ENST00000561330 TCHHQ07283 1943 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 PCNX1Q96RV3 2341 aa-0.66□□□□□ -2.52
USP8-218ENST00000561330 GNG14A0A1W2PPG7 69 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 NDUFB6O95139 128 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 NEFHP12036 1026 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 CCL8P80075 99 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 C10orf128Q5T292 105 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 SDF2Q99470 211 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 SPANXA1Q9NS26 97 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 V9GYH0 126 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 USH2AO75445 5202 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 MRC1P22897 1456 aa-0.67□□□□□ -2.52
USP8-218ENST00000561330 TMEM2Q9UHN6 1383 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 OVOS2A0A0J9YW53 1432 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 K7ERU9 68 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 PITX3O75364 302 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 TGP01266 2768 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 LINC00694P0DN24 101 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 COX17Q14061 63 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 MORN2Q502X0 79 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 OVOS2Q6IE36 1432 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 TAC4Q86UU9 113 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 AQP10Q96PS8 301 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 PSME4Q14997 1843 aa-0.68□□□□□ -2.52
USP8-218ENST00000561330 KIF21AQ7Z4S6 1674 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms