RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 HSD17B12Q53GQ0 312 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 LINC00305Q7Z4B0 112 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 NAA60Q9H7X0 242 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 UFC1Q9Y3C8 167 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 TULP4Q9NRJ4 1543 aa-2.19□□□□□ -2.76
CASC4-211ENST00000561305 C9orf92A6NGG3 77 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 GABARAPH6UMI1 98 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 UBE2D1P51668 147 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 CCL18P55774 89 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 LTC4SQ16873 150 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 PHB2Q99623 299 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 METTL1Q9UBP6 276 aaKnown RBP-2.2□□□□□ -2.76
CASC4-211ENST00000561305 SS18L2Q9UHA2 77 aa-2.2□□□□□ -2.76
CASC4-211ENST00000561305 GCN1Q92616 2671 aaKnown RBP-2.2□□□□□ -2.76
CASC4-211ENST00000561305 CPSF4LA6NMK7 179 aaKnown RBP-2.21□□□□□ -2.76
CASC4-211ENST00000561305 PPP5D1E7EU14 171 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 H0YAA0 97 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 H3BMG7 143 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 PIRTP0C851 137 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 TMED2Q15363 201 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 FRYQ5TBA9 3013 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 UHRF1BP1LA0JNW5 1464 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 POLA1P09884 1462 aaPredicted RBP-2.21□□□□□ -2.76
CASC4-211ENST00000561305 DNAH8Q96JB1 4490 aa-2.21□□□□□ -2.76
CASC4-211ENST00000561305 HMGXB3Q12766 1538 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 MED23Q9ULK4 1368 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 TRANK1O15050 2925 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 MYOM3Q5VTT5 1437 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 CEP295Q9C0D2 2601 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 TRBV7-6A0A0J9YX20 115 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 CRYBA4P53673 196 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 C9orf116Q5BN46 136 aaPredicted RBP-2.22□□□□□ -2.76
CASC4-211ENST00000561305 STX19Q8N4C7 294 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 USMG5Q96IX5 58 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 SLC35B3Q9H1N7 401 aa-2.22□□□□□ -2.76
CASC4-211ENST00000561305 FER1L6Q2WGJ9 1857 aa-2.22□□□□□ -2.77
CASC4-211ENST00000561305 PAPPA2Q9BXP8 1791 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 FAM186AA6NE01 2351 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 ANKRD50Q9ULJ7 1429 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 TRBV7-4A0A0J9YYF1 115 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 UQCRQO14949 82 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 PIPP12273 146 aaPredicted RBP-2.23□□□□□ -2.77
CASC4-211ENST00000561305 MT1XP80297 61 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 COX17Q14061 63 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 SNX29P2Q8IUI4 249 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 GINS3Q9BRX5 216 aa-2.23□□□□□ -2.77
CASC4-211ENST00000561305 NOP16Q9Y3C1 178 aaKnown RBP-2.23□□□□□ -2.77
CASC4-211ENST00000561305 NUP210Q8TEM1 1887 aaPredicted RBP-2.23□□□□□ -2.77
CASC4-211ENST00000561305 CHD7Q9P2D1 2997 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 COL6A5A8TX70 2615 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 K7EP34 96 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 M0R135 149 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 CTXN2P0C2S0 81 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 DEFB1P60022 68 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 TMEM170BQ5T4T1 132 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 ATP6V0E2Q8NHE4 81 aa-2.24□□□□□ -2.77
CASC4-211ENST00000561305 FMN2Q9NZ56 1722 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 PXDNQ92626 1479 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 REV3LO60673 3130 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 CTXND1A0A1B0GTU2 59 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 HIST1H1BP16401 226 aaKnown RBP-2.25□□□□□ -2.77
CASC4-211ENST00000561305 C10orf82Q8WW14 230 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 AMELXQ99217 191 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 R4GMQ9 66 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 NBEAL2Q6ZNJ1 2754 aa-2.25□□□□□ -2.77
CASC4-211ENST00000561305 MUC22E2RYF6 1773 aaPredicted RBP-2.26□□□□□ -2.77
CASC4-211ENST00000561305 ARHGEF12Q9NZN5 1544 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 SLC25A5P05141 298 aaKnown RBP-2.26□□□□□ -2.77
CASC4-211ENST00000561305 MT1HL1P0DM35 61 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 DHRS4L2Q6PKH6 230 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 CBLN4Q9NTU7 201 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 ZNF236Q9UL36 1845 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 MAGI1Q96QZ7 1491 aaPredicted RBP-2.26□□□□□ -2.77
CASC4-211ENST00000561305 C5orf42Q9H799 3197 aa-2.26□□□□□ -2.77
CASC4-211ENST00000561305 SETBP1Q9Y6X0 1596 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 PRDM2Q13029 1718 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 F8VRH5 84 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 J3QLW9 94 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 M0QZK8 103 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 S100A11P31949 105 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 UBE2D3P61077 147 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 UBE2D2P62837 147 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 ZNF818PQ6ZRF7 136 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 VSTM2AQ8TAG5 236 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 RPRMQ9NS64 109 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 SBF2Q86WG5 1849 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 A2MP01023 1474 aa-2.27□□□□□ -2.77
CASC4-211ENST00000561305 CEP290O15078 2479 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 BORCS7-ASMTA0A0B4J1R7 106 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 LINC00959A0A1B0GUT2 108 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 SSSCA1O60232 199 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 IFNA17P01571 189 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 RPL22P35268 128 aaKnown RBP-2.28□□□□□ -2.77
CASC4-211ENST00000561305 ALX1Q15699 326 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 OR13C6PQ8NH95 151 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 NDUFA12Q9UI09 145 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 LAMTOR2Q9Y2Q5 125 aa-2.28□□□□□ -2.77
CASC4-211ENST00000561305 PPP1R17O96001 155 aa-2.29□□□□□ -2.78
CASC4-211ENST00000561305 HSD11B1P28845 292 aa-2.29□□□□□ -2.78
CASC4-211ENST00000561305 KRTAP19-5Q3LI72 72 aa-2.29□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms