RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 SDIM1Q6ZPB5 146 aa8.97□□□□□ -0.97
USP8-215ENST00000560982 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
USP8-215ENST00000560982 UBE2L6O14933 153 aa8.96□□□□□ -0.98
USP8-215ENST00000560982 BCL2P10415 239 aa8.96□□□□□ -0.98
USP8-215ENST00000560982 CNBPP62633 177 aaKnown RBP8.96□□□□□ -0.98
USP8-215ENST00000560982 GFRA4Q9GZZ7 299 aa8.96□□□□□ -0.98
USP8-215ENST00000560982 PKHD1L1Q86WI1 4243 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 CTRLP40313 264 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 AMTP48728 403 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 HNRNPA3P51991 378 aaKnown RBP8.95□□□□□ -0.98
USP8-215ENST00000560982 COTL1Q14019 142 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 C9orf62Q8N4C0 152 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 NUDT10Q8NFP7 164 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 NUDT11Q96G61 164 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 AP5S1Q9NUS5 200 aa8.95□□□□□ -0.98
USP8-215ENST00000560982 TWIST1Q15672 202 aa8.94□□□□□ -0.98
USP8-215ENST00000560982 WDR73Q6P4I2 378 aa8.94□□□□□ -0.98
USP8-215ENST00000560982 HMCN2Q8NDA2 5059 aa8.93□□□□□ -0.98
USP8-215ENST00000560982 IGHV3-64A0A075B6Q5 118 aa8.93□□□□□ -0.98
USP8-215ENST00000560982 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.93□□□□□ -0.98
USP8-215ENST00000560982 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
USP8-215ENST00000560982 RNASE7Q9H1E1 156 aaKnown RBP8.93□□□□□ -0.98
USP8-215ENST00000560982 RPP21Q9H633 154 aaKnown RBP8.93□□□□□ -0.98
USP8-215ENST00000560982 TRAV26-2A0A0B4J265 109 aa8.92□□□□□ -0.98
USP8-215ENST00000560982 TAGLN2P37802 199 aaKnown RBP8.92□□□□□ -0.98
USP8-215ENST00000560982 CIRBPQ14011 172 aaKnown RBP8.92□□□□□ -0.98
USP8-215ENST00000560982 SLC51BQ86UW2 128 aa8.92□□□□□ -0.98
USP8-215ENST00000560982 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
USP8-215ENST00000560982 K7EN84 100 aa8.91□□□□□ -0.98
USP8-215ENST00000560982 SLPIP03973 132 aa8.91□□□□□ -0.98
USP8-215ENST00000560982 TCTE3Q8IZS6 198 aa8.91□□□□□ -0.98
USP8-215ENST00000560982 DPH3Q96FX2 82 aa8.91□□□□□ -0.98
USP8-215ENST00000560982 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
USP8-215ENST00000560982 GAGE12HA6NDE8 117 aa8.9□□□□□ -0.98
USP8-215ENST00000560982 CHTF8P0CG12 524 aa8.9□□□□□ -0.98
USP8-215ENST00000560982 OCC1Q8TAD7 63 aa8.9□□□□□ -0.98
USP8-215ENST00000560982 A0A087WYN8 130 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 CFAP161Q6P656 301 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 Q6ZNX1 250 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 SMIM15Q7Z3B0 74 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 C15orf56Q8N910 161 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 RPL39LQ96EH5 51 aaKnown RBP8.89□□□□□ -0.99
USP8-215ENST00000560982 RNF185Q96GF1 192 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 PLA2G2DQ9UNK4 145 aa8.89□□□□□ -0.99
USP8-215ENST00000560982 NCR2O95944 276 aa8.88□□□□□ -0.99
USP8-215ENST00000560982 FOXA3P55318 350 aaPredicted RBP8.88□□□□□ -0.99
USP8-215ENST00000560982 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
USP8-215ENST00000560982 SPACA4Q8TDM5 124 aa8.88□□□□□ -0.99
USP8-215ENST00000560982 GTSF1Q8WW33 167 aa8.88□□□□□ -0.99
USP8-215ENST00000560982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.87□□□□□ -0.99
USP8-215ENST00000560982 IGKV2-29A2NJV5 120 aaPredicted RBP8.87□□□□□ -0.99
USP8-215ENST00000560982 APCSP02743 223 aa8.87□□□□□ -0.99
USP8-215ENST00000560982 HIGD2BQ4VC39 106 aa8.87□□□□□ -0.99
USP8-215ENST00000560982 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
USP8-215ENST00000560982 SDHAF1A6NFY7 115 aa8.86□□□□□ -0.99
USP8-215ENST00000560982 H7C423 109 aa8.86□□□□□ -0.99
USP8-215ENST00000560982 GATCO43716 136 aaKnown RBP8.86□□□□□ -0.99
USP8-215ENST00000560982 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
USP8-215ENST00000560982 TEX261Q6UWH6 196 aa8.86□□□□□ -0.99
USP8-215ENST00000560982 Q6ZRU5 148 aa8.86□□□□□ -0.99
USP8-215ENST00000560982 FGF6P10767 208 aa8.85□□□□□ -0.99
USP8-215ENST00000560982 COX6A2Q02221 97 aa8.85□□□□□ -0.99
USP8-215ENST00000560982 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
USP8-215ENST00000560982 A8MWL6 223 aa8.84□□□□□ -0.99
USP8-215ENST00000560982 TMEM250H0YL14 139 aa8.84□□□□□ -0.99
USP8-215ENST00000560982 FAM231DQ6ZW35 169 aa8.84□□□□□ -0.99
USP8-215ENST00000560982 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
USP8-215ENST00000560982 I3L3M4 83 aa8.83□□□□□ -1
USP8-215ENST00000560982 PHOX2AO14813 284 aa8.83□□□□□ -1
USP8-215ENST00000560982 NDUFS6O75380 124 aaKnown RBP8.83□□□□□ -1
USP8-215ENST00000560982 MT1HL1P0DM35 61 aa8.83□□□□□ -1
USP8-215ENST00000560982 ZNF25P17030 456 aaPredicted RBP8.83□□□□□ -1
USP8-215ENST00000560982 PMCHP20382 165 aa8.83□□□□□ -1
USP8-215ENST00000560982 CEBPGP53567 150 aa8.83□□□□□ -1
USP8-215ENST00000560982 BLOC1S1P78537 153 aa8.83□□□□□ -1
USP8-215ENST00000560982 PRSS3P2Q8NHM4 247 aa8.83□□□□□ -1
USP8-215ENST00000560982 C7orf33Q8WU49 177 aa8.83□□□□□ -1
USP8-215ENST00000560982 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
USP8-215ENST00000560982 TRBV6-5A0A0K0K1A5 114 aa8.82□□□□□ -1
USP8-215ENST00000560982 FOXI1Q12951 378 aa8.82□□□□□ -1
USP8-215ENST00000560982 MAJINQ3KP22 176 aa8.82□□□□□ -1
USP8-215ENST00000560982 ALKAL2Q6UX46 152 aa8.82□□□□□ -1
USP8-215ENST00000560982 OR5A1Q8NGJ0 315 aa8.82□□□□□ -1
USP8-215ENST00000560982 BORCS7Q96B45 105 aa8.82□□□□□ -1
USP8-215ENST00000560982 TMEM101Q96IK0 257 aa8.82□□□□□ -1
USP8-215ENST00000560982 BTF3L4Q96K17 158 aa8.82□□□□□ -1
USP8-215ENST00000560982 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
USP8-215ENST00000560982 FAM231BA6NCW3 169 aa8.81□□□□□ -1
USP8-215ENST00000560982 XCL1P47992 114 aa8.81□□□□□ -1
USP8-215ENST00000560982 CT83Q5H943 113 aa8.81□□□□□ -1
USP8-215ENST00000560982 ST20Q9HBF5 79 aa8.81□□□□□ -1
USP8-215ENST00000560982 A6NJY4 79 aa8.8□□□□□ -1
USP8-215ENST00000560982 CCL25O15444 150 aa8.8□□□□□ -1
USP8-215ENST00000560982 GAS8-AS1O95177 125 aa8.8□□□□□ -1
USP8-215ENST00000560982 TSHBP01222 138 aa8.8□□□□□ -1
USP8-215ENST00000560982 ESDP10768 282 aa8.8□□□□□ -1
USP8-215ENST00000560982 STPG4Q8N801 248 aa8.8□□□□□ -1
USP8-215ENST00000560982 TMEM242Q9NWH2 141 aa8.8□□□□□ -1
USP8-215ENST00000560982 A0A096LNI7 61 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms