RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 ATRXP46100 2492 aa12.12□□□□□ -0.47
TPM1-228ENST00000560975 BPESC1Q9GZL8 116 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 Q9UF83 564 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 MAP1AP78559 2803 aaPredicted RBP12.11□□□□□ -0.47
TPM1-228ENST00000560975 IGHV1OR15-1A0A075B7D0 117 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 A0A1W2PPR1 153 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 DEFB121Q5J5C9 76 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 DCANP1Q8TF63 244 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
TPM1-228ENST00000560975 VPREB3Q9UKI3 123 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 PTPRQQ9UMZ3 2332 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 TMEM95Q3KNT9 176 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 ZNF625Q96I27 306 aaPredicted RBP12.1□□□□□ -0.47
TPM1-228ENST00000560975 SPANXA1Q9NS26 97 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 CREBBPQ92793 2442 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 DOPEY2Q9Y3R5 2298 aa12.1□□□□□ -0.47
TPM1-228ENST00000560975 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
TPM1-228ENST00000560975 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
TPM1-228ENST00000560975 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
TPM1-228ENST00000560975 BLCAPP62952 87 aa12.09□□□□□ -0.47
TPM1-228ENST00000560975 FBXL19-AS1Q494R0 122 aa12.08□□□□□ -0.47
TPM1-228ENST00000560975 VPS13CQ709C8 3753 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 USMG5Q96IX5 58 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 TMEM126AQ9H061 195 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 YAE1D1Q9NRH1 226 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 LMO4P61968 165 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 C9orf153Q5TBE3 101 aa12.08□□□□□ -0.48
TPM1-228ENST00000560975 CITED2Q99967 270 aaPredicted RBP12.08□□□□□ -0.48
TPM1-228ENST00000560975 PRM2P04554 102 aa12.07□□□□□ -0.48
TPM1-228ENST00000560975 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
TPM1-228ENST00000560975 PYGO1Q9Y3Y4 419 aa12.07□□□□□ -0.48
TPM1-228ENST00000560975 IGHV3-38A0A0C4DH36 116 aa12.06□□□□□ -0.48
TPM1-228ENST00000560975 ADORA2A-AS1P86434 159 aa12.06□□□□□ -0.48
TPM1-228ENST00000560975 IGHG2P01859 326 aa12.05□□□□□ -0.48
TPM1-228ENST00000560975 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
TPM1-228ENST00000560975 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
TPM1-228ENST00000560975 TINCRA0A1B0GVN0 87 aa12.05□□□□□ -0.48
TPM1-228ENST00000560975 KLK5Q9Y337 293 aaPredicted RBP12.05□□□□□ -0.48
TPM1-228ENST00000560975 H3BUX3 64 aa12.04□□□□□ -0.48
TPM1-228ENST00000560975 LOC107984640A0A0U1RRK4 108 aa12.03□□□□□ -0.48
TPM1-228ENST00000560975 Q8N2B8 174 aa12.03□□□□□ -0.48
TPM1-228ENST00000560975 DAZ2Q13117 558 aaKnown RBP12.03□□□□□ -0.48
TPM1-228ENST00000560975 DAZ4Q86SG3 579 aaKnown RBP12.03□□□□□ -0.48
TPM1-228ENST00000560975 DAZ3Q9NR90 486 aaKnown RBP12.03□□□□□ -0.48
TPM1-228ENST00000560975 ABCA2Q9BZC7 2435 aa12.03□□□□□ -0.48
TPM1-228ENST00000560975 SNRPD3P62318 126 aaKnown RBP12.02□□□□□ -0.48
TPM1-228ENST00000560975 C3orf22Q8N5N4 141 aa12.02□□□□□ -0.48
TPM1-228ENST00000560975 LINC00467Q9BRT7 94 aa12.02□□□□□ -0.48
TPM1-228ENST00000560975 UBE2D4Q9Y2X8 147 aa12.02□□□□□ -0.48
TPM1-228ENST00000560975 Q6ZSN1 163 aa12.02□□□□□ -0.49
TPM1-228ENST00000560975 LINC00308Q8TCZ7 52 aa12.02□□□□□ -0.49
TPM1-228ENST00000560975 ACYP1P07311 99 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
TPM1-228ENST00000560975 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 Q9H8V8 135 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 COX7A2LO14548 114 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 NDUFA7O95182 113 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 LINC00643Q86TS7 51 aa12.01□□□□□ -0.49
TPM1-228ENST00000560975 RBMY1A1P0DJD3 496 aaKnown RBP12□□□□□ -0.49
TPM1-228ENST00000560975 RBMY1CP0DJD4 496 aa12□□□□□ -0.49
TPM1-228ENST00000560975 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
TPM1-228ENST00000560975 RBMY1FQ15415 496 aaKnown RBP12□□□□□ -0.49
TPM1-228ENST00000560975 IMUPQ9GZP8 106 aa12□□□□□ -0.49
TPM1-228ENST00000560975 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
TPM1-228ENST00000560975 HERVK_113P63121 156 aa12□□□□□ -0.49
TPM1-228ENST00000560975 COX6A2Q02221 97 aa11.99□□□□□ -0.49
TPM1-228ENST00000560975 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
TPM1-228ENST00000560975 CSPG4Q6UVK1 2322 aa11.99□□□□□ -0.49
TPM1-228ENST00000560975 H3BUA1 57 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 NDUFA1O15239 70 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 TIMM17BO60830 172 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 C10orf99Q6UWK7 81 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 RS1O15537 224 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 GAGE2AQ6NT46 116 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 SOSTDC1Q6X4U4 206 aa11.98□□□□□ -0.49
TPM1-228ENST00000560975 K7EMT4 169 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 UQCRQO14949 82 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 DGAT2L7PQ6IED9 249 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 K7EQG2 157 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 IGLV1-40P01703 118 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 TIRAPP58753 221 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 Q9HAA7 133 aa11.97□□□□□ -0.49
TPM1-228ENST00000560975 FAM218AQ96MZ4 157 aa11.96□□□□□ -0.49
TPM1-228ENST00000560975 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.5
TPM1-228ENST00000560975 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
TPM1-228ENST00000560975 DNAJC30Q96LL9 226 aa11.95□□□□□ -0.5
TPM1-228ENST00000560975 IGF2RP11717 2491 aa11.95□□□□□ -0.5
TPM1-228ENST00000560975 LINC00526Q96FQ7 95 aa11.95□□□□□ -0.5
TPM1-228ENST00000560975 EDA2RQ9HAV5 297 aa11.95□□□□□ -0.5
TPM1-228ENST00000560975 A6NDX4 124 aa11.94□□□□□ -0.5
TPM1-228ENST00000560975 NRGNQ92686 78 aa11.94□□□□□ -0.5
TPM1-228ENST00000560975 HIVEP3Q5T1R4 2406 aa11.94□□□□□ -0.5
TPM1-228ENST00000560975 SPG11Q96JI7 2443 aa11.94□□□□□ -0.5
TPM1-228ENST00000560975 C22orf24Q9Y442 160 aa11.93□□□□□ -0.5
TPM1-228ENST00000560975 CSDC2Q9Y534 153 aaKnown RBP11.93□□□□□ -0.5
TPM1-228ENST00000560975 K7ENP7 123 aa11.93□□□□□ -0.5
TPM1-228ENST00000560975 PIK3CD-AS1Q5SR53 167 aa11.93□□□□□ -0.5
TPM1-228ENST00000560975 C2CD3Q4AC94 2353 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms