RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TCTAP57738 103 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 PROK1P58294 105 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 TMEM263Q8WUH6 116 aaKnown RBP7.04□□□□□ -1.28
RTF1-206ENST00000560447 PHLDA1Q8WV24 401 aaPredicted RBP7.04□□□□□ -1.28
RTF1-206ENST00000560447 PLEKHB2Q96CS7 222 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 VCX2Q9H322 139 aa7.04□□□□□ -1.28
RTF1-206ENST00000560447 ANK3Q12955 4377 aaKnown RBP7.04□□□□□ -1.28
RTF1-206ENST00000560447 H3BUT2 72 aa7.03□□□□□ -1.28
RTF1-206ENST00000560447 FOSL1P15407 271 aa7.03□□□□□ -1.28
RTF1-206ENST00000560447 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
RTF1-206ENST00000560447 DAZ2Q13117 558 aaKnown RBP7.03□□□□□ -1.28
RTF1-206ENST00000560447 NDUFA11Q86Y39 141 aa7.03□□□□□ -1.28
RTF1-206ENST00000560447 C1orf158Q8N1D5 194 aa7.03□□□□□ -1.28
RTF1-206ENST00000560447 TTTY13Q9BZ97 58 aa7.03□□□□□ -1.28
RTF1-206ENST00000560447 TRAV4A0A0B4J268 109 aa7.02□□□□□ -1.29
RTF1-206ENST00000560447 TMEM223A0PJW6 202 aa7.02□□□□□ -1.29
RTF1-206ENST00000560447 COTL1Q14019 142 aa7.02□□□□□ -1.29
RTF1-206ENST00000560447 RNASE8Q8TDE3 154 aaKnown RBP7.02□□□□□ -1.29
RTF1-206ENST00000560447 C16orf74Q96GX8 76 aa7.02□□□□□ -1.29
RTF1-206ENST00000560447 PDZD2O15018 2839 aa7.02□□□□□ -1.29
RTF1-206ENST00000560447 A0A1W2PRX2 142 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 J3QQQ9 107 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 SAP30O75446 220 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 HTN1P15515 57 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 LGALS3P17931 250 aaKnown RBP7.01□□□□□ -1.29
RTF1-206ENST00000560447 C12orf74Q32Q52 190 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 SCGB1D4Q6XE38 83 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 ZNRF2Q8NHG8 242 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 CHCHD7Q9BUK0 85 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 NHP2Q9NX24 153 aaKnown RBP7.01□□□□□ -1.29
RTF1-206ENST00000560447 XCL2Q9UBD3 114 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 MYO9AB2RTY4 2548 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 SORL1Q92673 2214 aa7.01□□□□□ -1.29
RTF1-206ENST00000560447 A0A0J9YY99 117 aa7□□□□□ -1.29
RTF1-206ENST00000560447 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
RTF1-206ENST00000560447 PAX4O43316 350 aa7□□□□□ -1.29
RTF1-206ENST00000560447 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
RTF1-206ENST00000560447 AZU1P20160 251 aa7□□□□□ -1.29
RTF1-206ENST00000560447 RPL36AP83881 106 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 DAZ4Q86SG3 579 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 SLC25A29Q8N8R3 303 aa7□□□□□ -1.29
RTF1-206ENST00000560447 RPL36ALQ969Q0 106 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 OVOL2Q9BRP0 275 aa7□□□□□ -1.29
RTF1-206ENST00000560447 DAZ3Q9NR90 486 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 C19orf73Q9NVV2 129 aa7□□□□□ -1.29
RTF1-206ENST00000560447 MRPL16Q9NX20 251 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 UBE2D4Q9Y2X8 147 aa7□□□□□ -1.29
RTF1-206ENST00000560447 CSDC2Q9Y534 153 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 SPCS1Q9Y6A9 102 aa7□□□□□ -1.29
RTF1-206ENST00000560447 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
RTF1-206ENST00000560447 AKAP9Q99996 3911 aa7□□□□□ -1.29
RTF1-206ENST00000560447 TENM4Q6N022 2769 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 GAGE12BA1L429 117 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 IGLL5B9A064 214 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 K7EQD1 137 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 INSL3P51460 131 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 UBE2D1P51668 147 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 RRN3P1Q2M238 152 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 LYRM7Q5U5X0 104 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 HIST2H2BCQ6DN03 193 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 ZNF479Q96JC4 524 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 CBY1Q9Y3M2 126 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 CSMD2Q7Z408 3487 aa6.99□□□□□ -1.29
RTF1-206ENST00000560447 TRGV1A0A0A0MS02 117 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 TMEM238C9JI98 176 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 H7C423 109 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 TIRAPP58753 221 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
RTF1-206ENST00000560447 C11orf44Q8N8P7 122 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 GTSF1LQ9H1H1 148 aa6.98□□□□□ -1.29
RTF1-206ENST00000560447 IGLV5-45A0A087WSX0 123 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 IGHV3-73A0A0B4J1V6 119 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 TRBV6-4A0A1B0GX49 114 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 K7ERU9 68 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 Q6ZSN1 163 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
RTF1-206ENST00000560447 IGHV1-58A0A0C4DH39 117 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 IGHV3-30P01768 117 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 GIG44P09565 113 aaPredicted RBP6.96□□□□□ -1.3
RTF1-206ENST00000560447 IGHV3-30-5P0DP03 117 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 EMP1P54849 157 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 UBE2D3P61077 147 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 UBE2D2P62837 147 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 LINC00482Q8N8I6 264 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 CSNK1G2-AS1Q8NCQ2 148 aa6.96□□□□□ -1.3
RTF1-206ENST00000560447 SMIM9A6NGZ8 99 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 F8W1H4 67 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 TIMM17BO60830 172 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 PF4P02776 101 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 TSPEAR-AS2P59090 65 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 RPL24P83731 157 aaKnown RBP6.95□□□□□ -1.3
RTF1-206ENST00000560447 OCIAD2Q56VL3 154 aa6.95□□□□□ -1.3
RTF1-206ENST00000560447 DGAT2L7PQ6IED9 249 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms