RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 DEFB109BQ30KR1 87 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 CEMP1Q6PRD7 247 aaPredicted RBP4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 FAM19A3Q7Z5A8 133 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 SERP2Q8N6R1 65 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 USMG5Q96IX5 58 aa4.34□□□□□ -1.71
SNRPA1-209ENST00000560307 IGHV3-35A0A0C4DH35 117 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 IGLV5-39A0A0G2JS06 123 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 K7EMT4 169 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 BCE1O60756 84 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 IGF1P05019 195 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 PRSS2P07478 247 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 DAZ2Q13117 558 aaKnown RBP4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 DAZ4Q86SG3 579 aaKnown RBP4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 SIRPDQ9H106 197 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 UBTD1Q9HAC8 227 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 DAZ1Q9NQZ3 744 aaKnown RBP4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 DAZ3Q9NR90 486 aaKnown RBP4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 LAMA1P25391 3075 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 SVILO95425 2214 aa4.33□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3OR16-8A0A075B7F1 116 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 NDUFC2O95298 119 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 PRB3Q04118 309 aaPredicted RBP4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 FBXL19-AS1Q494R0 122 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 S100A7L2Q5SY68 101 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 ADAMTSL4-AS1Q5T5F5 129 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 C5orf56Q8N8D9 126 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 MPLKIPQ8TAP9 179 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 LINC00308Q8TCZ7 52 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 DPH3Q96FX2 82 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 UPK3BQ9BT76 320 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 MOB4Q9Y3A3 225 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 LAMA3Q16787 3333 aa4.32□□□□□ -1.72
SNRPA1-209ENST00000560307 MUC4Q99102 2169 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 ARHGAP32A7KAX9 2087 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3-64A0A075B6Q5 118 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV1OR15-1A0A075B7D0 117 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3OR16-10A0A075B7F0 116 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 TRAV13-2A0A0B4J235 113 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 TRAV41A0A0B4J266 112 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 LOC107984640A0A0U1RRK4 108 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 INAFM1C9JVW0 142 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 BAALC-AS2P0C853 105 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 RPL28P46779 137 aaKnown RBP4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 PRIMA1Q86XR5 153 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 OBSCN-AS1Q96MR7 158 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 ZNF580Q9UK33 172 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 TECTAO75443 2155 aa4.31□□□□□ -1.72
SNRPA1-209ENST00000560307 CADP27708 2225 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3OR16-13A0A075B7E8 117 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3-49A0A0A0MS15 119 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV3-74A0A0B4J1X5 117 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 LYNX1G3V0Z9 82 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 H0YGX0 51 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 K7ENP7 123 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 DNAL4O96015 105 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 LYNX1P0DP58 116 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 LPAL2Q16609 132 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 Q75L30 129 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 C3orf56Q8N813 242 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 OPRPNQ99935 248 aaPredicted RBP4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 JPT2Q9H910 190 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 UBE2D4Q9Y2X8 147 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 SDK1Q7Z5N4 2213 aa4.3□□□□□ -1.72
SNRPA1-209ENST00000560307 FAM186AA6NE01 2351 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 PLCE1Q9P212 2302 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 TRBV10-3A0A0K0K1G6 114 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 hADV29S1A0JD25 119 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 G3V318 75 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 FAM74A4Q5TZK3 123 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 C11orf71Q6IPW1 123 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 CHCHD7Q9BUK0 85 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 KLK5Q9Y337 293 aaPredicted RBP4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 WDR87Q6ZQQ6 2873 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
SNRPA1-209ENST00000560307 TRAV13-1A0A0B4J241 112 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 TRAV12-3A0A0B4J271 114 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 A8MTW9 85 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 EPM2AB3EWF7 344 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 F6UB75 175 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 IGHV4-30-4P0DP06 118 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 PSMB8P28062 276 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 HOXD3P31249 432 aaPredicted RBP4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 UCNP55089 124 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 SYNJ2BPP57105 145 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 UNQ9165/PRO28630Q6UXU0 137 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 KIR2DL5BQ8NHK3 375 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 LINC00467Q9BRT7 94 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 RHPN1-AS1Q9BWJ2 59 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 PRO3102Q9H379 93 aa4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 PRRC2AP48634 2157 aaKnown RBP4.28□□□□□ -1.72
SNRPA1-209ENST00000560307 AHCTF1Q8WYP5 2266 aa4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 F5H768 121 aa4.27□□□□□ -1.73
SNRPA1-209ENST00000560307 CRPP02741 224 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms