RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 RHODO00212 210 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 EMP1P54849 157 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 MDFIQ99750 246 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 CMYA5Q8N3K9 4069 aa10.5□□□□□ -0.73
RABGGTA-212ENST00000559974 PKD1L1Q8TDX9 2849 aa10.49□□□□□ -0.73
RABGGTA-212ENST00000559974 K7EP13 123 aa10.49□□□□□ -0.73
RABGGTA-212ENST00000559974 MRPL16Q9NX20 251 aaKnown RBP10.49□□□□□ -0.73
RABGGTA-212ENST00000559974 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
RABGGTA-212ENST00000559974 SAP30O75446 220 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 SMIM13P0DJ93 91 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 HERVK_113P61574 105 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 RAB37Q96AX2 223 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 H3BUT2 72 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 Q6ZSN1 163 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 C1orf158Q8N1D5 194 aa10.48□□□□□ -0.73
RABGGTA-212ENST00000559974 ADARB2-AS1A8MUL3 147 aa10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 RS1O15537 224 aa10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 AZU1P20160 251 aa10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 CMC4P56277 68 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 ZNRF2Q8NHG8 242 aa10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 OPRPNQ99935 248 aaPredicted RBP10.47□□□□□ -0.73
RABGGTA-212ENST00000559974 ZNF815PA8K554 130 aa10.46□□□□□ -0.73
RABGGTA-212ENST00000559974 IGHV3-53P01767 116 aa10.46□□□□□ -0.73
RABGGTA-212ENST00000559974 NFE4Q86UQ8 179 aa10.46□□□□□ -0.73
RABGGTA-212ENST00000559974 HIST1H4GQ99525 98 aa10.46□□□□□ -0.73
RABGGTA-212ENST00000559974 DNHD1Q96M86 4753 aa10.46□□□□□ -0.73
RABGGTA-212ENST00000559974 TRBV7-3A0A075B6L6 115 aa10.46□□□□□ -0.74
RABGGTA-212ENST00000559974 IGHV3OR16-12A0A075B7B8 117 aa10.46□□□□□ -0.74
RABGGTA-212ENST00000559974 TMEM170BQ5T4T1 132 aa10.46□□□□□ -0.74
RABGGTA-212ENST00000559974 IL17DQ8TAD2 202 aa10.46□□□□□ -0.74
RABGGTA-212ENST00000559974 IGLV4-3A0A075B6K6 122 aa10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 IGLV1-51P01701 117 aa10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 DNAJC30Q96LL9 226 aa10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 NAA38Q9BRA0 125 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 NHP2Q9NX24 153 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 Q9UF83 564 aa10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 PYGO1Q9Y3Y4 419 aa10.45□□□□□ -0.74
RABGGTA-212ENST00000559974 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 K7ERJ3 54 aa10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 GTF2H5Q6ZYL4 71 aa10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 RNASE8Q8TDE3 154 aaKnown RBP10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 PHLDA1Q8WV24 401 aaPredicted RBP10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 VCX2Q9H322 139 aa10.44□□□□□ -0.74
RABGGTA-212ENST00000559974 A0A1W2PPM0 123 aa10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 SPATA3Q8NHX4 192 aa10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 SCGB1D4Q6XE38 83 aa10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 SVIPQ8NHG7 77 aa10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
RABGGTA-212ENST00000559974 TRGV1A0A0A0MS02 117 aa10.42□□□□□ -0.74
RABGGTA-212ENST00000559974 K7EP34 96 aa10.42□□□□□ -0.74
RABGGTA-212ENST00000559974 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
RABGGTA-212ENST00000559974 CITED1Q99966 193 aa10.42□□□□□ -0.74
RABGGTA-212ENST00000559974 CHCHD7Q9BUK0 85 aa10.42□□□□□ -0.74
RABGGTA-212ENST00000559974 CRYBA4P53673 196 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 SAMD5Q5TGI4 173 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 AMELXQ99217 191 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 TMEM223A0PJW6 202 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 GIG44P09565 113 aaPredicted RBP10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 FABP2P12104 132 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 TSPEAR-AS2P59090 65 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 FAM104AQ969W3 186 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 C19orf73Q9NVV2 129 aa10.41□□□□□ -0.74
RABGGTA-212ENST00000559974 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
RABGGTA-212ENST00000559974 A0A0J9YXV3 536 aa10.4□□□□□ -0.74
RABGGTA-212ENST00000559974 ZNF22P17026 224 aaPredicted RBP10.4□□□□□ -0.74
RABGGTA-212ENST00000559974 C12orf74Q32Q52 190 aa10.4□□□□□ -0.74
RABGGTA-212ENST00000559974 J3QQQ9 107 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 COTL1Q14019 142 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 A0A0J9YY99 117 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 GAGE12BA1L429 117 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 LGALS3P17931 250 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 CEMP1Q6PRD7 247 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 NDUFA11Q86Y39 141 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 UBE2D4Q9Y2X8 147 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 SPCS1Q9Y6A9 102 aa10.39□□□□□ -0.75
RABGGTA-212ENST00000559974 A0A1B0GWB2 263 aa10.38□□□□□ -0.75
RABGGTA-212ENST00000559974 LEPROTO15243 131 aa10.38□□□□□ -0.75
RABGGTA-212ENST00000559974 RPL35AP18077 110 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-212ENST00000559974 Q6ZTI0 123 aa10.38□□□□□ -0.75
RABGGTA-212ENST00000559974 ZNF479Q96JC4 524 aa10.38□□□□□ -0.75
RABGGTA-212ENST00000559974 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 IGKV2-29A2NJV5 120 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 MRPS36P82909 103 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 C3orf56Q8N813 242 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 C1QTNF4Q9BXJ3 329 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 IGLL5B9A064 214 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 OR5A1Q8NGJ0 315 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
RABGGTA-212ENST00000559974 TMEM238LA0A1B0GVL6 79 aa10.36□□□□□ -0.75
RABGGTA-212ENST00000559974 A6NJY4 79 aa10.36□□□□□ -0.75
RABGGTA-212ENST00000559974 NOP10Q9NPE3 64 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms