RNA–Protein interactions for RNA: ENST00000559229.1

IRF9-204, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-204ENST00000559229 GNG4P50150 75 aa9.71□□□□□ -0.86
IRF9-204ENST00000559229 RAB5CP51148 216 aa9.71□□□□□ -0.86
IRF9-204ENST00000559229 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
IRF9-204ENST00000559229 DPH3Q96FX2 82 aa9.71□□□□□ -0.86
IRF9-204ENST00000559229 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
IRF9-204ENST00000559229 UBE2L6O14933 153 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 IFNA1P01562 189 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 WDR73Q6P4I2 378 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 C9orf62Q8N4C0 152 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 RNF213Q63HN8 5207 aa9.7□□□□□ -0.86
IRF9-204ENST00000559229 A0A087WYN8 130 aa9.69□□□□□ -0.86
IRF9-204ENST00000559229 TEX46H3BTG2 121 aa9.69□□□□□ -0.86
IRF9-204ENST00000559229 PDE6DO43924 150 aa9.69□□□□□ -0.86
IRF9-204ENST00000559229 COTL1Q14019 142 aa9.69□□□□□ -0.86
IRF9-204ENST00000559229 BIN3Q9NQY0 253 aa9.69□□□□□ -0.86
IRF9-204ENST00000559229 MEF2BQ02080 365 aaPredicted RBP9.68□□□□□ -0.86
IRF9-204ENST00000559229 SPACA4Q8TDM5 124 aa9.68□□□□□ -0.86
IRF9-204ENST00000559229 TRBV20OR9-2A0A075B6H5 130 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 AMTP48728 403 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 SULT1A2P50226 295 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 EIF5AL1Q6IS14 154 aaKnown RBP9.67□□□□□ -0.86
IRF9-204ENST00000559229 CFAP161Q6P656 301 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
IRF9-204ENST00000559229 CTRLP40313 264 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 TWIST1Q15672 202 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 C15orf56Q8N910 161 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 NUDT10Q8NFP7 164 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 NUDT11Q96G61 164 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
IRF9-204ENST00000559229 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
IRF9-204ENST00000559229 GATD1Q8NB37 220 aa9.65□□□□□ -0.86
IRF9-204ENST00000559229 RPS10P46783 165 aaKnown RBP9.64□□□□□ -0.87
IRF9-204ENST00000559229 BCL2P10415 239 aa9.63□□□□□ -0.87
IRF9-204ENST00000559229 LRP2P98164 4655 aa9.63□□□□□ -0.87
IRF9-204ENST00000559229 COX6A2Q02221 97 aa9.63□□□□□ -0.87
IRF9-204ENST00000559229 C7orf33Q8WU49 177 aa9.63□□□□□ -0.87
IRF9-204ENST00000559229 TRAV26-2A0A0B4J265 109 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 IGKV3OR2-268A0A0C4DH90 116 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 H7C423 109 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 PHOX2AO14813 284 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 NDUFS6O75380 124 aaKnown RBP9.62□□□□□ -0.87
IRF9-204ENST00000559229 NCR2O95944 276 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 Q6ZNX1 250 aa9.62□□□□□ -0.87
IRF9-204ENST00000559229 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
IRF9-204ENST00000559229 RPP21Q9H633 154 aaKnown RBP9.62□□□□□ -0.87
IRF9-204ENST00000559229 TAGLN2P37802 199 aaKnown RBP9.61□□□□□ -0.87
IRF9-204ENST00000559229 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
IRF9-204ENST00000559229 PRSS3P2Q8NHM4 247 aa9.61□□□□□ -0.87
IRF9-204ENST00000559229 RNASE7Q9H1E1 156 aaKnown RBP9.61□□□□□ -0.87
IRF9-204ENST00000559229 K7EN84 100 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 MAJINQ3KP22 176 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 RNASEKQ6P5S7 137 aaKnown RBP9.6□□□□□ -0.87
IRF9-204ENST00000559229 TEX261Q6UWH6 196 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 OCC1Q8TAD7 63 aa9.6□□□□□ -0.87
IRF9-204ENST00000559229 RPL39LQ96EH5 51 aaKnown RBP9.6□□□□□ -0.87
IRF9-204ENST00000559229 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
IRF9-204ENST00000559229 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
IRF9-204ENST00000559229 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
IRF9-204ENST00000559229 GTSF1Q8WW33 167 aa9.59□□□□□ -0.87
IRF9-204ENST00000559229 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
IRF9-204ENST00000559229 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
IRF9-204ENST00000559229 APCSP02743 223 aa9.58□□□□□ -0.88
IRF9-204ENST00000559229 FGF6P10767 208 aa9.58□□□□□ -0.88
IRF9-204ENST00000559229 FOXA3P55318 350 aaPredicted RBP9.58□□□□□ -0.88
IRF9-204ENST00000559229 FOXI1Q12951 378 aa9.58□□□□□ -0.88
IRF9-204ENST00000559229 ZNF25P17030 456 aaPredicted RBP9.57□□□□□ -0.88
IRF9-204ENST00000559229 SLC51BQ86UW2 128 aa9.57□□□□□ -0.88
IRF9-204ENST00000559229 STPG4Q8N801 248 aa9.57□□□□□ -0.88
IRF9-204ENST00000559229 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
IRF9-204ENST00000559229 FAM231BA6NCW3 169 aa9.56□□□□□ -0.88
IRF9-204ENST00000559229 I3L3M4 83 aa9.56□□□□□ -0.88
IRF9-204ENST00000559229 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
IRF9-204ENST00000559229 LINC01600Q96MT4 127 aa9.56□□□□□ -0.88
IRF9-204ENST00000559229 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
IRF9-204ENST00000559229 TRBV6-5A0A0K0K1A5 114 aa9.55□□□□□ -0.88
IRF9-204ENST00000559229 PMCHP20382 165 aa9.55□□□□□ -0.88
IRF9-204ENST00000559229 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
IRF9-204ENST00000559229 BTF3L4Q96K17 158 aa9.55□□□□□ -0.88
IRF9-204ENST00000559229 FAM210AQ96ND0 272 aa9.55□□□□□ -0.88
IRF9-204ENST00000559229 A0A096LNI7 61 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 LINC00959A0A1B0GUT2 108 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 A8MWL6 223 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 GATCO43716 136 aaKnown RBP9.54□□□□□ -0.88
IRF9-204ENST00000559229 ESDP10768 282 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 XCL1P47992 114 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 FAM231DQ6ZW35 169 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 TCTE3Q8IZS6 198 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 TMEM101Q96IK0 257 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
IRF9-204ENST00000559229 IGHV1-58A0A0C4DH39 117 aa9.53□□□□□ -0.88
IRF9-204ENST00000559229 TMEM250H0YL14 139 aa9.53□□□□□ -0.88
IRF9-204ENST00000559229 CCL25O15444 150 aa9.53□□□□□ -0.88
IRF9-204ENST00000559229 TSHBP01222 138 aa9.51□□□□□ -0.89
IRF9-204ENST00000559229 CT83Q5H943 113 aa9.51□□□□□ -0.89
IRF9-204ENST00000559229 MRAP2Q96G30 205 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms