RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 KLKP1Q107X0 134 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 TRAV7A0A075B6U4 112 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 ASCC3Q8N3C0 2202 aaKnown RBP4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 IGHV3-72A0A0B4J1Y9 119 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 SMIM27A0A1W2PRY6 76 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 Q6JHZ5 121 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 CAMK2N2Q96S95 79 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 ZFHX4Q86UP3 3567 aa4.03□□□□□ -1.76
CTDSPL2-206ENST00000559175 DNAL4O96015 105 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 CRIP3Q6Q6R5 217 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 USP34Q70CQ2 3546 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 C16orf90A8MZG2 172 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 C3orf84H3BNL1 204 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 CFC1P0CG37 223 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 SPANXN1Q5VSR9 72 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 SPAG17Q6Q759 2223 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 CACNA1DQ01668 2161 aa4.02□□□□□ -1.77
CTDSPL2-206ENST00000559175 DNAJC13O75165 2243 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 ZNF137PP52743 207 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 Q96M85 177 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 H7C423 109 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 C2orf66Q6UXQ4 117 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 Q8N7P7 452 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 FDCSPQ8NFU4 85 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 TRAV22A0A0B4J277 110 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGKV1D-33P01593 117 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGKV1-33P01594 117 aa4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 SAA1P0DJI8 122 aaPredicted RBP4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 RPL27AP46776 148 aaKnown RBP4.01□□□□□ -1.77
CTDSPL2-206ENST00000559175 UBR5O95071 2799 aaPredicted RBP4□□□□□ -1.77
CTDSPL2-206ENST00000559175 GNRH2O43555 120 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 MIFP14174 115 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 C7orf33Q8WU49 177 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 CACNA1AO00555 2505 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 LY6G6DO95868 133 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGHV3-11P01762 117 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 LYPD2Q6UXB3 125 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 B9D2Q9BPU9 175 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 CEP290O15078 2479 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 ALPK2Q86TB3 2170 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 SDHAF1A6NFY7 115 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 BAALC-AS2P0C853 105 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 DEFB119Q8N690 84 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 UBE2D4Q9Y2X8 147 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 TIMM9Q9Y5J7 89 aa4□□□□□ -1.77
CTDSPL2-206ENST00000559175 MUC4Q99102 2169 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 C19orf84I3L1E1 186 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 K7ERS5 55 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 CCL3P10147 92 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 ZNF355PQ9NSJ1 428 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGHV3-49A0A0A0MS15 119 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 A8MU10 97 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 A8MWP4 228 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 D6R8Y8 96 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 ZGRF1Q86YA3 2104 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 MUSTN1Q8IVN3 82 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 CNEP1R1Q8N9A8 125 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 NPBQ8NG41 125 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 DEFB126Q9BYW3 111 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 RP1L1Q8IWN7 2480 aaPredicted RBP3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 PMS2P5A8MQ11 134 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 HIGD1CA8MV81 97 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 B4DSR2 109 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 CRPP02741 224 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 CCL4P13236 92 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 CD24P25063 80 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 RNASE13Q5GAN3 156 aaKnown RBP3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 VMO1Q7Z5L0 202 aa3.99□□□□□ -1.77
CTDSPL2-206ENST00000559175 RPL28P46779 137 aaKnown RBP3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 C9orf116Q5BN46 136 aaPredicted RBP3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 LINC01006Q8NI28 216 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 PATE1Q8WXA2 126 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 C11orf1Q9H5F2 150 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 FAM186AA6NE01 2351 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 ZNF826PQ6ZT77 177 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 ZNF525Q8N782 197 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 RP1P56715 2156 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 PRR14LQ5THK1 2151 aa3.98□□□□□ -1.77
CTDSPL2-206ENST00000559175 KNTC1P50748 2209 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGLV3-9A0A075B6K5 115 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 RPS27P42677 84 aaKnown RBP3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 U3KQK5 164 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 DEFB133Q30KQ1 61 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 WDFY3Q8IZQ1 3526 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 MYO15AQ9UKN7 3530 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 LY6HO94772 140 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGHV3-23P01764 117 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 IGHV3-13P01766 116 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 FXYD4P59646 89 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 CACNA1EQ15878 2313 aa3.97□□□□□ -1.77
CTDSPL2-206ENST00000559175 INTS1Q8N201 2190 aaKnown RBP3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms