RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 TIRAPP58753 221 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 GAGE6Q13070 117 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 COX19Q49B96 90 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 UPK3BQ9BT76 320 aa8.48□□□□□ -1.05
GABPB1-208ENST00000558970 IGHV1-24A0A0C4DH33 117 aa8.47□□□□□ -1.05
GABPB1-208ENST00000558970 TSHBP01222 138 aa8.47□□□□□ -1.05
GABPB1-208ENST00000558970 FCER1GP30273 86 aa8.47□□□□□ -1.05
GABPB1-208ENST00000558970 POLR2KP53803 58 aaKnown RBP8.47□□□□□ -1.05
GABPB1-208ENST00000558970 SMIM2Q9BVW6 85 aa8.47□□□□□ -1.05
GABPB1-208ENST00000558970 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
GABPB1-208ENST00000558970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-208ENST00000558970 IGKV2-29A2NJV5 120 aaPredicted RBP8.46□□□□□ -1.06
GABPB1-208ENST00000558970 UBE2L6O14933 153 aa8.46□□□□□ -1.06
GABPB1-208ENST00000558970 TMEM97Q5BJF2 176 aa8.46□□□□□ -1.06
GABPB1-208ENST00000558970 TMEM243Q9BU79 118 aa8.46□□□□□ -1.06
GABPB1-208ENST00000558970 KRTAP1-5Q9BYS1 174 aa8.46□□□□□ -1.06
GABPB1-208ENST00000558970 A0A087WX48 190 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 TRBV27A0A0K0K1C4 114 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 VCYO14598 125 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 TCAPO15273 167 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 MPV17L2Q567V2 206 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 KIR2DL4Q99706 377 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 C20orf78Q9BR46 151 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
GABPB1-208ENST00000558970 PHOX2AO14813 284 aa8.44□□□□□ -1.06
GABPB1-208ENST00000558970 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
GABPB1-208ENST00000558970 NIT1Q86X76 327 aa8.44□□□□□ -1.06
GABPB1-208ENST00000558970 Q8N976 141 aa8.44□□□□□ -1.06
GABPB1-208ENST00000558970 ALKBH7Q9BT30 221 aaPredicted RBP8.44□□□□□ -1.06
GABPB1-208ENST00000558970 KMT2AQ03164 3969 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 DNAH6Q9C0G6 4158 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 COLCA2A8K830 154 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 DNAH10OSP0CZ25 163 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 IFI27P40305 119 aaPredicted RBP8.43□□□□□ -1.06
GABPB1-208ENST00000558970 CLPSL2Q6UWE3 100 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 CHCHD7Q9BUK0 85 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 LAMTOR2Q9Y2Q5 125 aa8.43□□□□□ -1.06
GABPB1-208ENST00000558970 ANGP03950 147 aaKnown RBP8.42□□□□□ -1.06
GABPB1-208ENST00000558970 TRGC2P03986 189 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 RAB5AP20339 215 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 TTC32Q5I0X7 151 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 LINC01556Q5JQF7 62 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 AMMECR1LQ6DCA0 310 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 RNASEKQ6P5S7 137 aaKnown RBP8.42□□□□□ -1.06
GABPB1-208ENST00000558970 Q9HAA7 133 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 KLK12Q9UKR0 248 aa8.42□□□□□ -1.06
GABPB1-208ENST00000558970 HERC2O95714 4834 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 RBX1P62877 108 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 Q6ZR54 194 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 Q8N8P6 123 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 PRSS3P2Q8NHM4 247 aa8.41□□□□□ -1.06
GABPB1-208ENST00000558970 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
GABPB1-208ENST00000558970 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
GABPB1-208ENST00000558970 RPL39P62891 51 aaKnown RBP8.4□□□□□ -1.06
GABPB1-208ENST00000558970 RPL32P62910 135 aaKnown RBP8.4□□□□□ -1.06
GABPB1-208ENST00000558970 FGF6P10767 208 aa8.39□□□□□ -1.07
GABPB1-208ENST00000558970 ESDP10768 282 aa8.39□□□□□ -1.07
GABPB1-208ENST00000558970 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
GABPB1-208ENST00000558970 C18orf32Q8TCD1 76 aa8.39□□□□□ -1.07
GABPB1-208ENST00000558970 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
GABPB1-208ENST00000558970 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
GABPB1-208ENST00000558970 PRSS47A8MTI9 375 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 CRPP02741 224 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 BTF3P20290 206 aaKnown RBP8.38□□□□□ -1.07
GABPB1-208ENST00000558970 PKIAP61925 76 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
GABPB1-208ENST00000558970 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 FA2HQ7L5A8 372 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
GABPB1-208ENST00000558970 DNAH10Q8IVF4 4471 aa8.37□□□□□ -1.07
GABPB1-208ENST00000558970 LAGE3Q14657 143 aa8.37□□□□□ -1.07
GABPB1-208ENST00000558970 C6orf223Q8N319 242 aa8.37□□□□□ -1.07
GABPB1-208ENST00000558970 C20orf203Q8NBC4 194 aa8.37□□□□□ -1.07
GABPB1-208ENST00000558970 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
GABPB1-208ENST00000558970 IGLV10-54A0A075B6I4 117 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 IBA57-AS1B1ANH7 110 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 ORMDL2Q53FV1 153 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 DGAT2L7PQ6IED9 249 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 OR5A1Q8NGJ0 315 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 TMEM18Q96B42 140 aa8.36□□□□□ -1.07
GABPB1-208ENST00000558970 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
GABPB1-208ENST00000558970 ENHOQ6UWT2 76 aa8.35□□□□□ -1.07
GABPB1-208ENST00000558970 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
GABPB1-208ENST00000558970 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
GABPB1-208ENST00000558970 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
GABPB1-208ENST00000558970 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
GABPB1-208ENST00000558970 IGKV2D-24A0A075B6R9 120 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 H7C423 109 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 REG3AQ06141 175 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 Q6ZUT4 128 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 BAGE3Q86Y29 109 aa8.34□□□□□ -1.07
GABPB1-208ENST00000558970 FRAS1Q86XX4 4008 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 K7EP13 123 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 RTL8CO15255 209 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 PSCAO43653 123 aa8.33□□□□□ -1.08
GABPB1-208ENST00000558970 LINC00614P0C842 121 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms