RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 BAGE2Q86Y30 109 aa11.28□□□□□ -0.6
ABCD4-228ENST00000557588 ALG5Q9Y673 324 aa11.28□□□□□ -0.6
ABCD4-228ENST00000557588 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 SCO2A0A1W2PP80 73 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 PAGE4O60829 102 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 IGLC6P0CF74 106 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 COTL1Q14019 142 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 NIT2Q9NQR4 276 aa11.27□□□□□ -0.61
ABCD4-228ENST00000557588 FOXI1Q12951 378 aa11.26□□□□□ -0.61
ABCD4-228ENST00000557588 FER1L6-AS1Q8NA97 138 aa11.25□□□□□ -0.61
ABCD4-228ENST00000557588 CACNG7P62955 275 aa11.24□□□□□ -0.61
ABCD4-228ENST00000557588 ZNF664Q8N3J9 261 aa11.24□□□□□ -0.61
ABCD4-228ENST00000557588 CARD19Q96LW7 228 aa11.24□□□□□ -0.61
ABCD4-228ENST00000557588 TPPP3Q9BW30 176 aa11.24□□□□□ -0.61
ABCD4-228ENST00000557588 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
ABCD4-228ENST00000557588 GIPP09681 153 aaPredicted RBP11.22□□□□□ -0.61
ABCD4-228ENST00000557588 FAT4Q6V0I7 4981 aa11.21□□□□□ -0.61
ABCD4-228ENST00000557588 FXYD6-FXYD2A0A087WZ82 144 aa11.21□□□□□ -0.61
ABCD4-228ENST00000557588 PFDN1O60925 122 aa11.21□□□□□ -0.61
ABCD4-228ENST00000557588 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
ABCD4-228ENST00000557588 AMMECR1LQ6DCA0 310 aa11.21□□□□□ -0.61
ABCD4-228ENST00000557588 IGHV1-58A0A0C4DH39 117 aa11.2□□□□□ -0.62
ABCD4-228ENST00000557588 NTF3P20783 257 aa11.2□□□□□ -0.62
ABCD4-228ENST00000557588 PTTG1IPP53801 180 aa11.2□□□□□ -0.62
ABCD4-228ENST00000557588 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
ABCD4-228ENST00000557588 LINC00526Q96FQ7 95 aa11.2□□□□□ -0.62
ABCD4-228ENST00000557588 A0A0U1RQV1 116 aa11.19□□□□□ -0.62
ABCD4-228ENST00000557588 H7C423 109 aa11.19□□□□□ -0.62
ABCD4-228ENST00000557588 TMUB2Q71RG4 321 aa11.19□□□□□ -0.62
ABCD4-228ENST00000557588 F2Z2F3 143 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 NCR2O95944 276 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
ABCD4-228ENST00000557588 XCL1P47992 114 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 RNASEKQ6P5S7 137 aaKnown RBP11.18□□□□□ -0.62
ABCD4-228ENST00000557588 Q6ZNX1 250 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 OR2D3Q8NGH3 330 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 CYTL1Q9NRR1 136 aa11.18□□□□□ -0.62
ABCD4-228ENST00000557588 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.17□□□□□ -0.62
ABCD4-228ENST00000557588 TRAV26-2A0A0B4J265 109 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 IGKV2-29A2NJV5 120 aaPredicted RBP11.17□□□□□ -0.62
ABCD4-228ENST00000557588 FGF6P10767 208 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 SYCNQ0VAF6 134 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 OR5A1Q8NGJ0 315 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 SFT2D1Q8WV19 159 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 MBD3L1Q8WWY6 194 aa11.17□□□□□ -0.62
ABCD4-228ENST00000557588 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
ABCD4-228ENST00000557588 ZNF25P17030 456 aaPredicted RBP11.16□□□□□ -0.62
ABCD4-228ENST00000557588 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
ABCD4-228ENST00000557588 LOC107984640A0A0U1RRK4 108 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 A0A1W2PNN7 141 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 CCL25O15444 150 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 APCSP02743 223 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 MT-ND6P03923 174 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 C11orf52Q96A22 123 aa11.15□□□□□ -0.62
ABCD4-228ENST00000557588 LINC00959A0A1B0GUT2 108 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 A0A1B0GV50 99 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 CENPWQ5EE01 88 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 LYZL1Q6UWQ5 148 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 GATD1Q8NB37 220 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 FAM213BQ8TBF2 198 aa11.14□□□□□ -0.63
ABCD4-228ENST00000557588 KRTAP9-6A0A140TA67 174 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 XKRY2A2RUG3 117 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 G3V3Q6 166 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 CTRLP40313 264 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 CAMPP49913 170 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 KCNRGQ8N5I3 272 aa11.13□□□□□ -0.63
ABCD4-228ENST00000557588 C1orf137Q5JT78 98 aa11.12□□□□□ -0.63
ABCD4-228ENST00000557588 DIRC1Q969H9 104 aa11.12□□□□□ -0.63
ABCD4-228ENST00000557588 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
ABCD4-228ENST00000557588 CNFNQ9BYD5 112 aa11.12□□□□□ -0.63
ABCD4-228ENST00000557588 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
ABCD4-228ENST00000557588 C9orf116Q5BN46 136 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-228ENST00000557588 CD164L2Q6UWJ8 174 aa11.11□□□□□ -0.63
ABCD4-228ENST00000557588 C9orf62Q8N4C0 152 aa11.11□□□□□ -0.63
ABCD4-228ENST00000557588 ISOC2Q96AB3 205 aa11.11□□□□□ -0.63
ABCD4-228ENST00000557588 RPL39LQ96EH5 51 aaKnown RBP11.11□□□□□ -0.63
ABCD4-228ENST00000557588 ARPC5O15511 151 aa11.1□□□□□ -0.63
ABCD4-228ENST00000557588 IFNA1P01562 189 aa11.1□□□□□ -0.63
ABCD4-228ENST00000557588 LCE2AQ5TA79 106 aaPredicted RBP11.1□□□□□ -0.63
ABCD4-228ENST00000557588 BTF3L4Q96K17 158 aa11.1□□□□□ -0.63
ABCD4-228ENST00000557588 APOMO95445 188 aa11.09□□□□□ -0.63
ABCD4-228ENST00000557588 BCL2P10415 239 aa11.09□□□□□ -0.63
ABCD4-228ENST00000557588 NUP35Q8NFH5 326 aa11.09□□□□□ -0.63
ABCD4-228ENST00000557588 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
ABCD4-228ENST00000557588 IGLV4-69A0A075B6H9 119 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 IGLV1-50A0A075B6I6 118 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 SDHAF1A6NFY7 115 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 H0Y9J4 135 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 IGLV7-43P04211 117 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 SS18Q15532 418 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 TWIST1Q15672 202 aa11.08□□□□□ -0.64
ABCD4-228ENST00000557588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-228ENST00000557588 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
ABCD4-228ENST00000557588 PRR4Q16378 134 aa11.07□□□□□ -0.64
ABCD4-228ENST00000557588 PHF5AQ7RTV0 110 aaKnown RBP11.07□□□□□ -0.64
ABCD4-228ENST00000557588 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
ABCD4-228ENST00000557588 H2AFB1P0C5Y9 115 aa11.06□□□□□ -0.64
ABCD4-228ENST00000557588 ESDP10768 282 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms