RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 CLRN3Q8NCR9 226 aa9.15□□□□□ -0.94
SNX6-210ENST00000557341 NUDT10Q8NFP7 164 aa9.15□□□□□ -0.94
SNX6-210ENST00000557341 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
SNX6-210ENST00000557341 IGLV4-60A0A075B6I1 120 aa9.14□□□□□ -0.95
SNX6-210ENST00000557341 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
SNX6-210ENST00000557341 LRP1Q07954 4544 aaKnown RBP9.13□□□□□ -0.95
SNX6-210ENST00000557341 K7EN84 100 aa9.13□□□□□ -0.95
SNX6-210ENST00000557341 PKHD1L1Q86WI1 4243 aa9.13□□□□□ -0.95
SNX6-210ENST00000557341 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
SNX6-210ENST00000557341 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
SNX6-210ENST00000557341 CNBPP62633 177 aaKnown RBP9.12□□□□□ -0.95
SNX6-210ENST00000557341 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
SNX6-210ENST00000557341 TRAV26-2A0A0B4J265 109 aa9.11□□□□□ -0.95
SNX6-210ENST00000557341 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
SNX6-210ENST00000557341 GATD1Q8NB37 220 aa9.11□□□□□ -0.95
SNX6-210ENST00000557341 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
SNX6-210ENST00000557341 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
SNX6-210ENST00000557341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.11□□□□□ -0.95
SNX6-210ENST00000557341 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
SNX6-210ENST00000557341 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
SNX6-210ENST00000557341 TMEM250H0YL14 139 aa9.1□□□□□ -0.95
SNX6-210ENST00000557341 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
SNX6-210ENST00000557341 NCR2O95944 276 aa9.09□□□□□ -0.95
SNX6-210ENST00000557341 OXTP01178 125 aa9.09□□□□□ -0.95
SNX6-210ENST00000557341 TEX261Q6UWH6 196 aa9.09□□□□□ -0.95
SNX6-210ENST00000557341 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
SNX6-210ENST00000557341 AKAP14Q86UN6 197 aa9.09□□□□□ -0.95
SNX6-210ENST00000557341 IGHV3-64A0A075B6Q5 118 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 PANO1I0J062 215 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 GATCO43716 136 aaKnown RBP9.08□□□□□ -0.96
SNX6-210ENST00000557341 APCSP02743 223 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 BLOC1S1P78537 153 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 AMMECR1LQ6DCA0 310 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 ALKAL2Q6UX46 152 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 Q6ZNX1 250 aa9.08□□□□□ -0.96
SNX6-210ENST00000557341 RPL39LQ96EH5 51 aaKnown RBP9.08□□□□□ -0.96
SNX6-210ENST00000557341 A8MWL6 223 aa9.07□□□□□ -0.96
SNX6-210ENST00000557341 CIRBPQ14011 172 aaKnown RBP9.07□□□□□ -0.96
SNX6-210ENST00000557341 FAM231DQ6ZW35 169 aa9.07□□□□□ -0.96
SNX6-210ENST00000557341 IGKV3OR2-268A0A0C4DH90 116 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 SDHAF1A6NFY7 115 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 H7C423 109 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 CEBPGP53567 150 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 CT83Q5H943 113 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
SNX6-210ENST00000557341 C15orf56Q8N910 161 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 LYPD6BQ8NI32 183 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
SNX6-210ENST00000557341 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.05□□□□□ -0.96
SNX6-210ENST00000557341 IGKV2-29A2NJV5 120 aaPredicted RBP9.05□□□□□ -0.96
SNX6-210ENST00000557341 GAGE12HA6NDE8 117 aa9.05□□□□□ -0.96
SNX6-210ENST00000557341 FOXA3P55318 350 aaPredicted RBP9.05□□□□□ -0.96
SNX6-210ENST00000557341 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
SNX6-210ENST00000557341 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
SNX6-210ENST00000557341 SLPIP03973 132 aa9.04□□□□□ -0.96
SNX6-210ENST00000557341 FGF6P10767 208 aa9.04□□□□□ -0.96
SNX6-210ENST00000557341 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
SNX6-210ENST00000557341 HNRNPA3P51991 378 aaKnown RBP9.04□□□□□ -0.96
SNX6-210ENST00000557341 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
SNX6-210ENST00000557341 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
SNX6-210ENST00000557341 hCG_2014768A0A024R1R8 64 aa9.03□□□□□ -0.96
SNX6-210ENST00000557341 I3L3M4 83 aa9.03□□□□□ -0.96
SNX6-210ENST00000557341 CHTF8P0CG12 524 aa9.03□□□□□ -0.96
SNX6-210ENST00000557341 CHCHD10Q8WYQ3 142 aaPredicted RBP9.03□□□□□ -0.96
SNX6-210ENST00000557341 SMIM7Q9BQ49 75 aa9.03□□□□□ -0.96
SNX6-210ENST00000557341 TRBV6-5A0A0K0K1A5 114 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 PMCHP20382 165 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 HIGD2BQ4VC39 106 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 LINC01551Q86U37 167 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 DPH3Q96FX2 82 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 BTF3L4Q96K17 158 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 EIF5A2Q9GZV4 153 aaKnown RBP9.02□□□□□ -0.97
SNX6-210ENST00000557341 HMCN2Q8NDA2 5059 aa9.02□□□□□ -0.97
SNX6-210ENST00000557341 A0A087WYN8 130 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
SNX6-210ENST00000557341 A0A1B0GUT8 65 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 NDUFS6O75380 124 aaKnown RBP9.01□□□□□ -0.97
SNX6-210ENST00000557341 RPS10P46783 165 aaKnown RBP9.01□□□□□ -0.97
SNX6-210ENST00000557341 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 TSKUQ8WUA8 353 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 MRAP2Q96G30 205 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 TMEM101Q96IK0 257 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 FAM210AQ96ND0 272 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 ST20Q9HBF5 79 aa9.01□□□□□ -0.97
SNX6-210ENST00000557341 ZNF727A8MUV8 499 aa9□□□□□ -0.97
SNX6-210ENST00000557341 TMEM191AQ9H0A3 160 aa9□□□□□ -0.97
SNX6-210ENST00000557341 FAM231BA6NCW3 169 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 TSHBP01222 138 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 ESDP10768 282 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 COX6A2Q02221 97 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 FOXI1Q12951 378 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 TMEM242Q9NWH2 141 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 PLAC8Q9NZF1 115 aa8.99□□□□□ -0.97
SNX6-210ENST00000557341 GAS8-AS1O95177 125 aa8.98□□□□□ -0.97
SNX6-210ENST00000557341 XCL1P47992 114 aa8.98□□□□□ -0.97
SNX6-210ENST00000557341 Q6ZRU5 148 aa8.98□□□□□ -0.97
SNX6-210ENST00000557341 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
SNX6-210ENST00000557341 TRBV27A0A0K0K1C4 114 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms