RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 C11orf72Q8NBR9 251 aa16.45■□□□□ 0.22
RCCD1-208ENST00000557266 LEPROTO15243 131 aa16.44■□□□□ 0.22
RCCD1-208ENST00000557266 CFAP126Q5VTH2 177 aa16.44■□□□□ 0.22
RCCD1-208ENST00000557266 Q6ZSV7 163 aa16.44■□□□□ 0.22
RCCD1-208ENST00000557266 PYGO1Q9Y3Y4 419 aa16.44■□□□□ 0.22
RCCD1-208ENST00000557266 TSPAN13O95857 204 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 PTH2Q96A98 100 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 TNFRSF18Q9Y5U5 241 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 TMEM86BQ8N661 226 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 RAX2Q96IS3 184 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 LINC01587Q99440 93 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 PRO0461Q9UI25 63 aa16.43■□□□□ 0.22
RCCD1-208ENST00000557266 LINC00467Q9BRT7 94 aa16.42■□□□□ 0.22
RCCD1-208ENST00000557266 NACAE9PAV3 2078 aa16.42■□□□□ 0.22
RCCD1-208ENST00000557266 APOMO95445 188 aa16.42■□□□□ 0.22
RCCD1-208ENST00000557266 NDUFA11Q86Y39 141 aa16.42■□□□□ 0.22
RCCD1-208ENST00000557266 IGHV3-64A0A075B6Q5 118 aa16.41■□□□□ 0.22
RCCD1-208ENST00000557266 CEMP1Q6PRD7 247 aaPredicted RBP16.41■□□□□ 0.22
RCCD1-208ENST00000557266 MTURNQ8N3F0 131 aa16.41■□□□□ 0.22
RCCD1-208ENST00000557266 INSP01308 110 aa16.4■□□□□ 0.22
RCCD1-208ENST00000557266 GAGE13Q4V321 117 aa16.4■□□□□ 0.22
RCCD1-208ENST00000557266 FLNAP21333 2647 aaKnown RBP16.4■□□□□ 0.22
RCCD1-208ENST00000557266 DNAJC9-AS1A6NH13 148 aa16.39■□□□□ 0.21
RCCD1-208ENST00000557266 SONP18583 2426 aaKnown RBP16.39■□□□□ 0.21
RCCD1-208ENST00000557266 CFC1BP0CG36 223 aa16.39■□□□□ 0.21
RCCD1-208ENST00000557266 CFC1P0CG37 223 aa16.39■□□□□ 0.21
RCCD1-208ENST00000557266 ODF3L2Q3SX64 289 aa16.39■□□□□ 0.21
RCCD1-208ENST00000557266 CHCHD7Q9BUK0 85 aa16.39■□□□□ 0.21
RCCD1-208ENST00000557266 BEAN1Q3B7T3 259 aa16.38■□□□□ 0.21
RCCD1-208ENST00000557266 SFTA2Q6UW10 78 aa16.37■□□□□ 0.21
RCCD1-208ENST00000557266 SH2D6Q7Z4S9 175 aa16.37■□□□□ 0.21
RCCD1-208ENST00000557266 MRPS36P82909 103 aaKnown RBP16.37■□□□□ 0.21
RCCD1-208ENST00000557266 IGHV3-53P01767 116 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 CRYBA4P53673 196 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 UBE2D3P61077 147 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 UBE2D2P62837 147 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 ETDBQ3ZM63 59 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 RNASE13Q5GAN3 156 aaKnown RBP16.36■□□□□ 0.21
RCCD1-208ENST00000557266 C11orf44Q8N8P7 122 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 SPXQ9BT56 116 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 XCL2Q9UBD3 114 aa16.36■□□□□ 0.21
RCCD1-208ENST00000557266 LOC107984156A0A0G2JMH3 177 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 AZU1P20160 251 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 FHL3Q13643 280 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 ARL17AQ8IVW1 177 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 C10orf126Q8N4M7 172 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 UBE2D4Q9Y2X8 147 aa16.35■□□□□ 0.21
RCCD1-208ENST00000557266 A0A1W2PRX2 142 aa16.34■□□□□ 0.21
RCCD1-208ENST00000557266 RS1O15537 224 aa16.34■□□□□ 0.21
RCCD1-208ENST00000557266 ESM1Q9NQ30 184 aa16.34■□□□□ 0.21
RCCD1-208ENST00000557266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.34■□□□□ 0.21
RCCD1-208ENST00000557266 IGKV2-29A2NJV5 120 aaPredicted RBP16.34■□□□□ 0.21
RCCD1-208ENST00000557266 IGHV3-30-3P0DP02 117 aa16.33■□□□□ 0.21
RCCD1-208ENST00000557266 SPANXA1Q9NS26 97 aa16.33■□□□□ 0.21
RCCD1-208ENST00000557266 CUBNO60494 3623 aa16.33■□□□□ 0.2
RCCD1-208ENST00000557266 NF1P21359 2839 aa16.33■□□□□ 0.2
RCCD1-208ENST00000557266 IGHV3-38A0A0C4DH36 116 aa16.33■□□□□ 0.2
RCCD1-208ENST00000557266 TRAV25A0A0B4J276 109 aa16.32■□□□□ 0.2
RCCD1-208ENST00000557266 DNAJC30Q96LL9 226 aa16.32■□□□□ 0.2
RCCD1-208ENST00000557266 TIMM21Q9BVV7 248 aa16.32■□□□□ 0.2
RCCD1-208ENST00000557266 EIF4EBP3O60516 100 aaPredicted RBP16.31■□□□□ 0.2
RCCD1-208ENST00000557266 PSMB2P49721 201 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 C1orf158Q8N1D5 194 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 A4D1N5 150 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 CCL24O00175 119 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 COTL1Q14019 142 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 STHQ8IWL8 128 aa16.31■□□□□ 0.2
RCCD1-208ENST00000557266 TRAV8-3A0A0A6YYJ7 113 aa16.3■□□□□ 0.2
RCCD1-208ENST00000557266 A0A0J9YXY3 114 aa16.3■□□□□ 0.2
RCCD1-208ENST00000557266 Q6ZUT4 128 aa16.3■□□□□ 0.2
RCCD1-208ENST00000557266 TEX29Q8N6K0 151 aa16.3■□□□□ 0.2
RCCD1-208ENST00000557266 PRO1854Q9UHT4 67 aa16.3■□□□□ 0.2
RCCD1-208ENST00000557266 SMCPP49901 116 aaPredicted RBP16.3■□□□□ 0.2
RCCD1-208ENST00000557266 TINCRA0A1B0GVN0 87 aa16.29■□□□□ 0.2
RCCD1-208ENST00000557266 ADARB2-AS1A8MUL3 147 aa16.29■□□□□ 0.2
RCCD1-208ENST00000557266 KRTAP1-1Q07627 177 aa16.29■□□□□ 0.2
RCCD1-208ENST00000557266 IL17DQ8TAD2 202 aa16.29■□□□□ 0.2
RCCD1-208ENST00000557266 IGHV3OR16-12A0A075B7B8 117 aa16.28■□□□□ 0.2
RCCD1-208ENST00000557266 TMEM238C9JI98 176 aa16.28■□□□□ 0.2
RCCD1-208ENST00000557266 MUSTN1Q8IVN3 82 aa16.28■□□□□ 0.2
RCCD1-208ENST00000557266 LYRM7Q5U5X0 104 aa16.28■□□□□ 0.2
RCCD1-208ENST00000557266 IGHV1-58A0A0C4DH39 117 aa16.27■□□□□ 0.2
RCCD1-208ENST00000557266 TCL1BO95988 128 aa16.26■□□□□ 0.19
RCCD1-208ENST00000557266 TMEM263Q8WUH6 116 aaKnown RBP16.26■□□□□ 0.19
RCCD1-208ENST00000557266 LITAFQ99732 161 aa16.26■□□□□ 0.19
RCCD1-208ENST00000557266 ACANP16112 2415 aa16.26■□□□□ 0.19
RCCD1-208ENST00000557266 INSL3P51460 131 aa16.25■□□□□ 0.19
RCCD1-208ENST00000557266 CITED2Q99967 270 aaPredicted RBP16.25■□□□□ 0.19
RCCD1-208ENST00000557266 TRGV1A0A0A0MS02 117 aa16.25■□□□□ 0.19
RCCD1-208ENST00000557266 J3QR89 54 aa16.25■□□□□ 0.19
RCCD1-208ENST00000557266 VSIG2Q96IQ7 327 aa16.25■□□□□ 0.19
RCCD1-208ENST00000557266 WNK1Q9H4A3 2382 aa16.25■□□□□ 0.19
RCCD1-208ENST00000557266 NOTCH2Q04721 2471 aa16.24■□□□□ 0.19
RCCD1-208ENST00000557266 TSSC4Q9Y5U2 329 aaPredicted RBP16.24■□□□□ 0.19
RCCD1-208ENST00000557266 A0A0B4J2C4 111 aa16.24■□□□□ 0.19
RCCD1-208ENST00000557266 A8MZ25 164 aa16.23■□□□□ 0.19
RCCD1-208ENST00000557266 IGHV3-33P01772 117 aa16.23■□□□□ 0.19
RCCD1-208ENST00000557266 SPINK8P0C7L1 97 aa16.23■□□□□ 0.19
RCCD1-208ENST00000557266 TRBV20-1A0A075B6N2 111 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms