RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 IGHV3-30-5P0DP03 117 aa9.58□□□□□ -0.88
SLIRP-207ENST00000556831 TWIST1Q15672 202 aa9.58□□□□□ -0.88
SLIRP-207ENST00000556831 PYY3Q5JQD4 70 aa9.58□□□□□ -0.88
SLIRP-207ENST00000556831 DNAH5Q8TE73 4624 aa9.58□□□□□ -0.88
SLIRP-207ENST00000556831 IFITM10A6NMD0 228 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 A8MWL6 223 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 PSCAO43653 123 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 CTRLP40313 264 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 LBHQ53QV2 105 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-207ENST00000556831 FAM231DQ6ZW35 169 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 GNB1LQ9BYB4 327 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 KRTAP4-5Q9BYR2 181 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 DPH3P1Q9H4G8 78 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
SLIRP-207ENST00000556831 LRP1BQ9NZR2 4599 aa9.57□□□□□ -0.88
SLIRP-207ENST00000556831 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
SLIRP-207ENST00000556831 NTF3P20783 257 aa9.56□□□□□ -0.88
SLIRP-207ENST00000556831 UBE2D3P61077 147 aa9.56□□□□□ -0.88
SLIRP-207ENST00000556831 UBE2D2P62837 147 aa9.56□□□□□ -0.88
SLIRP-207ENST00000556831 TNFRSF18Q9Y5U5 241 aa9.56□□□□□ -0.88
SLIRP-207ENST00000556831 A0A087WX48 190 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 TMEM97Q5BJF2 176 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 CT83Q5H943 113 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 NEXN-AS1Q8NBZ9 246 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 Q9HAA7 133 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 Q9UF83 564 aa9.55□□□□□ -0.88
SLIRP-207ENST00000556831 LINC00587B1AMM8 73 aa9.54□□□□□ -0.88
SLIRP-207ENST00000556831 DAZ4Q86SG3 579 aaKnown RBP9.54□□□□□ -0.88
SLIRP-207ENST00000556831 DAZ3Q9NR90 486 aaKnown RBP9.54□□□□□ -0.88
SLIRP-207ENST00000556831 C16orf90A8MZG2 172 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 IBA57-AS1B1ANH7 110 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 ESDP10768 282 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 Q0VG73 95 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 LAGE3Q14657 143 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 PDZD11Q5EBL8 140 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 SUMO4Q6EEV6 95 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 PGLYRP4Q96LB8 373 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 CNFNQ9BYD5 112 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 KIF25-AS1Q9Y6Z4 181 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 V9GYV3 84 aa9.53□□□□□ -0.88
SLIRP-207ENST00000556831 TMEM262E9PQX1 116 aa9.52□□□□□ -0.89
SLIRP-207ENST00000556831 ATP5L2Q7Z4Y8 100 aa9.52□□□□□ -0.89
SLIRP-207ENST00000556831 SPATA12Q7Z6I5 190 aa9.52□□□□□ -0.89
SLIRP-207ENST00000556831 CHCHD5Q9BSY4 110 aa9.52□□□□□ -0.89
SLIRP-207ENST00000556831 TM2D2Q9BX73 214 aa9.52□□□□□ -0.89
SLIRP-207ENST00000556831 MRPL18Q9H0U6 180 aaKnown RBP9.52□□□□□ -0.89
SLIRP-207ENST00000556831 TRBV6-8A0A0A6YYG3 113 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-207ENST00000556831 Q6ZRN7 208 aaPredicted RBP9.51□□□□□ -0.89
SLIRP-207ENST00000556831 MRPL52Q86TS9 123 aaKnown RBP9.51□□□□□ -0.89
SLIRP-207ENST00000556831 TSKUQ8WUA8 353 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 GTSF1Q8WW33 167 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 RMI2Q96E14 147 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 CHCHD7Q9BUK0 85 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 GFRA4Q9GZZ7 299 aa9.51□□□□□ -0.89
SLIRP-207ENST00000556831 APOBP04114 4563 aaKnown RBP9.51□□□□□ -0.89
SLIRP-207ENST00000556831 TRBV25-1A0A075B6N4 114 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 SMIM27A0A1W2PRY6 76 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 HIGD1CA8MV81 97 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 M0QY20 66 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 RAB4AP20338 218 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 NIT1Q86X76 327 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 BAGE3Q86Y29 109 aa9.5□□□□□ -0.89
SLIRP-207ENST00000556831 HSPG2P98160 4391 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 A0A1B0GUT8 65 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 CRPP02741 224 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 DDTP30046 118 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 NAT8BQ9UHF3 227 aa9.49□□□□□ -0.89
SLIRP-207ENST00000556831 IGHV1-24A0A0C4DH33 117 aa9.48□□□□□ -0.89
SLIRP-207ENST00000556831 COX11Q9Y6N1 276 aa9.48□□□□□ -0.89
SLIRP-207ENST00000556831 A0A087WTM6 91 aa9.47□□□□□ -0.89
SLIRP-207ENST00000556831 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
SLIRP-207ENST00000556831 RIGQ13278 110 aa9.47□□□□□ -0.89
SLIRP-207ENST00000556831 Q8N3U1 123 aa9.47□□□□□ -0.89
SLIRP-207ENST00000556831 KLK12Q9UKR0 248 aa9.47□□□□□ -0.89
SLIRP-207ENST00000556831 UBE2L6O14933 153 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 SCGB1D1O95968 90 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 APCSP02743 223 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 FUSP35637 526 aaKnown RBP eCLIP9.46□□□□□ -0.9
SLIRP-207ENST00000556831 COTL1Q14019 142 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 CDPF1Q6NVV7 123 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 UBE2WQ96B02 151 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
SLIRP-207ENST00000556831 IGKV2D-24A0A075B6R9 120 aa9.45□□□□□ -0.9
SLIRP-207ENST00000556831 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
SLIRP-207ENST00000556831 A0A1B0GW15 77 aa9.45□□□□□ -0.9
SLIRP-207ENST00000556831 ANGP03950 147 aaKnown RBP9.45□□□□□ -0.9
SLIRP-207ENST00000556831 TMEM136Q6ZRR5 245 aa9.45□□□□□ -0.9
SLIRP-207ENST00000556831 AMTP48728 403 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 KRTAP10-2P60368 255 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 GAGE6Q13070 117 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 GATD1Q8NB37 220 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 TMEM243Q9BU79 118 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 TMEM191AQ9H0A3 160 aa9.44□□□□□ -0.9
SLIRP-207ENST00000556831 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
SLIRP-207ENST00000556831 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 219.7 ms