RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 C15orf56Q8N910 161 aa9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
SUPT16H-205ENST00000556217 IGKV2-24A0A0C4DH68 120 aa9.71□□□□□ -0.86
SUPT16H-205ENST00000556217 XKRY2A2RUG3 117 aa9.71□□□□□ -0.86
SUPT16H-205ENST00000556217 F2Z2F3 143 aa9.71□□□□□ -0.86
SUPT16H-205ENST00000556217 TRGC1P0CF51 173 aa9.71□□□□□ -0.86
SUPT16H-205ENST00000556217 COTL1Q14019 142 aa9.71□□□□□ -0.86
SUPT16H-205ENST00000556217 STPG4Q8N801 248 aa9.7□□□□□ -0.86
SUPT16H-205ENST00000556217 OR2D3Q8NGH3 330 aa9.7□□□□□ -0.86
SUPT16H-205ENST00000556217 PRSS3P2Q8NHM4 247 aa9.7□□□□□ -0.86
SUPT16H-205ENST00000556217 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 G3V3Q6 166 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 H2AFB1P0C5Y9 115 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 HIGD2BQ4VC39 106 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 REG3GQ6UW15 175 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 LINC00474Q9P2X8 69 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
SUPT16H-205ENST00000556217 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
SUPT16H-205ENST00000556217 CENPWQ5EE01 88 aa9.68□□□□□ -0.86
SUPT16H-205ENST00000556217 LYPD6BQ8NI32 183 aa9.68□□□□□ -0.86
SUPT16H-205ENST00000556217 GVQW2A0A096LPI5 108 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 ZNF345Q14585 488 aa9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 SPINK6Q6UWN8 80 aa9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 CHCHD10Q8WYQ3 142 aaPredicted RBP9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 MANBALQ9NQG1 85 aa9.67□□□□□ -0.86
SUPT16H-205ENST00000556217 C19orf71A6NCJ1 209 aa9.66□□□□□ -0.86
SUPT16H-205ENST00000556217 IFNA1P01562 189 aa9.66□□□□□ -0.86
SUPT16H-205ENST00000556217 LYZL1Q6UWQ5 148 aa9.66□□□□□ -0.86
SUPT16H-205ENST00000556217 SMIM12Q96EX1 92 aa9.66□□□□□ -0.86
SUPT16H-205ENST00000556217 KRTAP9-2Q9BYQ4 174 aa9.66□□□□□ -0.86
SUPT16H-205ENST00000556217 A0A096LNI7 61 aa9.65□□□□□ -0.86
SUPT16H-205ENST00000556217 NTF3P20783 257 aa9.65□□□□□ -0.86
SUPT16H-205ENST00000556217 GNG4P50150 75 aa9.65□□□□□ -0.86
SUPT16H-205ENST00000556217 BIN3Q9NQY0 253 aa9.65□□□□□ -0.86
SUPT16H-205ENST00000556217 GNG13Q9P2W3 67 aa9.65□□□□□ -0.86
SUPT16H-205ENST00000556217 H7C423 109 aa9.64□□□□□ -0.87
SUPT16H-205ENST00000556217 NCR2O95944 276 aa9.64□□□□□ -0.87
SUPT16H-205ENST00000556217 KRTAP10-8P60410 259 aa9.64□□□□□ -0.87
SUPT16H-205ENST00000556217 RNASEKQ6P5S7 137 aaKnown RBP9.64□□□□□ -0.87
SUPT16H-205ENST00000556217 KANTRA0A1W2PQU2 76 aa9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 EIF5AP63241 154 aaKnown RBP9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 CCL20P78556 96 aa9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 ODF1Q14990 250 aa9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 TWIST1Q15672 202 aa9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 C9orf62Q8N4C0 152 aa9.63□□□□□ -0.87
SUPT16H-205ENST00000556217 SMLR1H3BR10 107 aa9.62□□□□□ -0.87
SUPT16H-205ENST00000556217 CTRLP40313 264 aa9.62□□□□□ -0.87
SUPT16H-205ENST00000556217 LCE2DQ5TA82 110 aaPredicted RBP9.62□□□□□ -0.87
SUPT16H-205ENST00000556217 Q6ZRP5 223 aa9.62□□□□□ -0.87
SUPT16H-205ENST00000556217 RAB19A4D1S5 217 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 TEX46H3BTG2 121 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 BCL2L11O43521 198 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 APCSP02743 223 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 ZNF25P17030 456 aaPredicted RBP9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 FOXI1Q12951 378 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
SUPT16H-205ENST00000556217 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 TRAV1-1A0A0B4J248 108 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 TRAV26-2A0A0B4J265 109 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 IGKV2-29A2NJV5 120 aaPredicted RBP9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 HMSDA8MTL9 139 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 PDE6DO43924 150 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 FGF6P10767 208 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 Q6ZNX1 250 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 SMIM15Q7Z3B0 74 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 OR5A1Q8NGJ0 315 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 BTF3L4Q96K17 158 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 CARD19Q96LW7 228 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 BATF3Q9NR55 127 aa9.6□□□□□ -0.87
SUPT16H-205ENST00000556217 IGHV1-58A0A0C4DH39 117 aa9.59□□□□□ -0.87
SUPT16H-205ENST00000556217 XCL1P47992 114 aa9.59□□□□□ -0.87
SUPT16H-205ENST00000556217 SRSF9Q13242 221 aaKnown RBP eCLIP9.59□□□□□ -0.87
SUPT16H-205ENST00000556217 TEX261Q6UWH6 196 aa9.59□□□□□ -0.87
SUPT16H-205ENST00000556217 TMEM101Q96IK0 257 aa9.59□□□□□ -0.87
SUPT16H-205ENST00000556217 MEF2BQ02080 365 aaPredicted RBP9.58□□□□□ -0.88
SUPT16H-205ENST00000556217 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
SUPT16H-205ENST00000556217 SDHAF1A6NFY7 115 aa9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 RGS21Q2M5E4 152 aa9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 NUDT10Q8NFP7 164 aa9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 RPL39LQ96EH5 51 aaKnown RBP9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 NUDT11Q96G61 164 aa9.57□□□□□ -0.88
SUPT16H-205ENST00000556217 TRBV20OR9-2A0A075B6H5 130 aa9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 CCL25O15444 150 aa9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 SS18Q15532 418 aa9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 RPP21Q9H633 154 aaKnown RBP9.56□□□□□ -0.88
SUPT16H-205ENST00000556217 I3L3M4 83 aa9.55□□□□□ -0.88
SUPT16H-205ENST00000556217 PMCHP20382 165 aa9.55□□□□□ -0.88
SUPT16H-205ENST00000556217 EIF5AL1Q6IS14 154 aaKnown RBP9.55□□□□□ -0.88
SUPT16H-205ENST00000556217 ISOC2Q96AB3 205 aa9.55□□□□□ -0.88
SUPT16H-205ENST00000556217 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
SUPT16H-205ENST00000556217 KRTAP9-6A0A140TA67 174 aa9.54□□□□□ -0.88
SUPT16H-205ENST00000556217 FAM231BA6NCW3 169 aa9.54□□□□□ -0.88
SUPT16H-205ENST00000556217 PTTG1IPP53801 180 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms